RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 XRRA1Q6P2D8 792 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 SYCE2Q6PIF2 218 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 DCLRE1AQ6PJP8 1040 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 ANKRD18AQ8IVF6 992 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 SLC43A3Q8NBI5 491 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 RETREG2Q8NC44 543 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 LRRN4CLQ8ND94 238 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 SPATA20Q8TB22 786 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 GPR152Q8TDT2 470 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 ATP8B4Q8TF62 1192 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 TTC9Q92623 222 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 MYD88Q99836 296 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 TMEM9BQ9NQ34 198 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 ANO2Q9NQ90 1003 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 SLC5A4Q9NY91 659 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 NRBP1Q9UHY1 535 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 TTF2Q9UNY4 1162 aaKnown RBP2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 MTF2Q9Y483 593 aaPredicted RBP2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 TELO2Q9Y4R8 837 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 LRRFIP2Q9Y608 721 aaKnown RBP2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 PKD1L1Q8TDX9 2849 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 TICRRQ7Z2Z1 1910 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 ATMQ13315 3056 aa2.52□□□□□ -2.01
RNU6-548P-201ENST00000517083 ARAP2Q8WZ64 1704 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 ROBO3Q96MS0 1386 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 ABHD14A-ACY1A0A1B0GW23 586 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 LNP1A1A4G5 178 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 FAM170BA6NMN3 283 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 ATP5J2-PTCD1G3V325 749 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 C2CD2LO14523 706 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 KCNQ3O43525 872 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 EPN2O95208 641 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 HMOX1P09601 288 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 WEE2P0C1S8 567 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SUPT20HL2P0C7V6 817 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CNR2P34972 360 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 BMPR1AP36894 532 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 MAGEA9P43362 315 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CCT4P50991 539 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SPP2Q13103 211 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 MTAPQ13126 283 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 PPP2R5DQ14738 602 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 IGFBP7Q16270 282 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 MTHFSDQ2M296 383 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SMTNL2Q2TAL5 461 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 RTL5Q5HYW3 569 aaPredicted RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 GNASQ5JWF2 1037 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CES5AQ6NT32 575 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CNKSR3Q6P9H4 555 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CXCL17Q6UXB2 119 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SPNS3Q6ZMD2 512 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 FAM83AQ86UY5 434 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 TXNRD3Q86VQ6 643 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 NLRP10Q86W26 655 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 PPARGC1BQ86YN6 1023 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 TMC8Q8IU68 726 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 MYOCDQ8IZQ8 938 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 LINC01465Q8N7H1 131 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 PNPLA1Q8N8W4 532 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 ADAMTS14Q8WXS8 1223 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 RTF1Q92541 710 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 TSC1Q92574 1164 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SHDQ96IW2 340 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 HIC2Q96JB3 615 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 LOXL4Q96JB6 756 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CDC5LQ99459 802 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CARD11Q9BXL7 1154 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CSRNP2Q9H175 543 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SPC25Q9HBM1 224 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 ZSWIM6Q9HCJ5 1215 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 TRMT13Q9NUP7 481 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 USP40Q9NVE5 1235 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 DBF4Q9UBU7 674 aaPredicted RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 SERPINA10Q9UK55 444 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 DBR1Q9UK59 544 aaKnown RBP2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 USTQ9Y2C2 406 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 LOC285556D6RIA3 1793 aa2.51□□□□□ -2.01
RNU6-548P-201ENST00000517083 CSMD2Q7Z408 3487 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 PHLPP2Q6ZVD8 1323 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 KANSL1LA0AUZ9 987 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 FSD2A1L4K1 749 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 TMEM200CA6NKL6 621 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 CHURC1-FNTBB4DL54 471 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 COBLO75128 1261 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 AGFG2O95081 481 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 EOMESO95936 686 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 AMHP03971 560 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 MMP3P08254 477 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 ZNF865P0CJ78 1059 aaPredicted RBP2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 PRF1P14222 555 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 HOXB8P17481 243 aaPredicted RBP2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 DNAJB1P25685 340 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 CSTF2P33240 577 aaKnown RBP eCLIP2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 AFMP43652 599 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 CRKP46108 304 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 FNTBP49356 437 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 STARD6P59095 220 aa2.5□□□□□ -2.01
RNU6-548P-201ENST00000517083 FKBP1AP62942 108 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms