RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 ZG16BQ96DA0 208 aa2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 ATG4CQ96DT6 458 aa2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 YTHDC1Q96MU7 727 aaKnown RBP2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 C8orf37Q96NL8 207 aa2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 FCRL3Q96P31 734 aaPredicted RBP2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 DSCC1Q9BVC3 393 aa2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 MKRN2Q9H000 416 aaKnown RBP2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 CCSER2Q9H7U1 834 aa2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 NGRNQ9NPE2 291 aaKnown RBP2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 PCDHB14Q9Y5E9 798 aa2.81□□□□□ -1.96
RNU2-56P-201ENST00000516826 KRTAP29-1A8MX34 341 aaPredicted RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 TNFRSF10CO14798 259 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 TLR3O15455 904 aaKnown RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 CYP1A1P04798 512 aaPredicted RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 FGRP09769 529 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 FBLP22087 321 aaKnown RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 ERCC5P28715 1186 aaPredicted RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 POLR2BP30876 1174 aaKnown RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 ITGA1P56199 1179 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 KRTAP10-9P60411 292 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 CLCQ05315 142 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 LRRFIP1Q32MZ4 808 aaKnown RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 SEZ6Q53EL9 994 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 OVOS1Q6IE37 1185 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 NLRC3Q7RTR2 1065 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 C19orf47Q8N9M1 422 aaKnown RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 EDAQ92838 391 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 NKD1Q969G9 470 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 SEC16BQ96JE7 1060 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 ZNF512BQ96KM6 892 aaPredicted RBP2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 GMLQ99445 158 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 MTA3Q9BTC8 594 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 TMEM168Q9H0V1 697 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 ACBD3Q9H3P7 528 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 RXFP1Q9HBX9 757 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 JADE2Q9NQC1 790 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 STRIP2Q9ULQ0 834 aa2.8□□□□□ -1.96
RNU2-56P-201ENST00000516826 CYP7B1O75881 506 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 ATF4P18848 351 aaPredicted RBP2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 IL13P35225 146 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 ZC3H6P61129 1189 aaKnown RBP2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 PTH1RQ03431 593 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 LSM12Q3MHD2 195 aaKnown RBP2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 INTS3Q68E01 1043 aaKnown RBP2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 RCSD1Q6JBY9 416 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 ZC3H18Q86VM9 953 aaKnown RBP2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 KBTBD2Q8IY47 623 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 KLHL36Q8N4N3 616 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 OR6P1Q8NGX9 317 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 SHDQ96IW2 340 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 DHRS1Q96LJ7 313 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 TM9SF2Q99805 663 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 MEGF9Q9H1U4 602 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 SEC61A2Q9H9S3 476 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 GINM1Q9NU53 330 aa2.79□□□□□ -1.96
RNU2-56P-201ENST00000516826 SHOXO15266 292 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 B4GALT4O60513 344 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 PPP1R11O60927 126 aaPredicted RBP2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 NME1P15531 152 aaKnown RBP2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 GIPRP48546 466 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 KRTAP10-11P60412 298 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 NRN1LQ496H8 165 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 PRAMEF18Q5VWM3 479 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 EEF1DP3Q658K8 133 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 WWC2Q6AWC2 1192 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 CD300LDQ6UXZ3 194 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 GK5Q6ZS86 529 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 LDLRAD3Q86YD5 345 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 SLC6A18Q96N87 628 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 L2HGDHQ9H9P8 463 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 SUCOQ9UBS9 1254 aaKnown RBP2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 FBLN5Q9UBX5 448 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 PPT2Q9UMR5 302 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 EFR3BQ9Y2G0 817 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 INPP5FQ9Y2H2 1132 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 SF3B6Q9Y3B4 125 aaKnown RBP2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 FHOD1Q9Y613 1164 aa2.78□□□□□ -1.96
RNU2-56P-201ENST00000516826 A0A087WZG4 1122 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 H0Y8X5 98 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 PLSCR1O15162 318 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 GUCY2CP25092 1073 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 MCM4P33991 863 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 CASP7P55210 303 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 USP39Q53GS9 565 aaKnown RBP2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 PCSK4Q6UW60 755 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 MCF2L2Q86YR7 1114 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 FAM26EQ8N5C1 309 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 SMARCC1Q92922 1105 aaPredicted RBP2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 SLC9A7Q96T83 725 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 PTPN18Q99952 460 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 CSRNP2Q9H175 543 aa2.77□□□□□ -1.97
RNU2-56P-201ENST00000516826 U2SURPO15042 1029 aaKnown RBP2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 NASPP49321 788 aaPredicted RBP2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 RGS19P49795 217 aa2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 ZNF445P59923 1031 aa2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 ADAM9Q13443 819 aa2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 GNL2Q13823 731 aaKnown RBP2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 CCDC142Q17RM4 750 aa2.76□□□□□ -1.97
RNU2-56P-201ENST00000516826 NOL9Q5SY16 702 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms