RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MTF2Q9Y483 593 aaPredicted RBP4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 MIA3Q5JRA6 1907 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 TANC1Q9C0D5 1861 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 ABHD14A-ACY1A0A1B0GW23 586 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 A1L4Q6 167 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 CNMDO75829 334 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 SNRPA1P09661 255 aaKnown RBP4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 BMPR1AP36894 532 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 MAGEA9P43362 315 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 CRKP46108 304 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 DCAF6Q58WW2 860 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 GNASQ5JWF2 1037 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 CEP68Q76N32 757 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 NLRP10Q86W26 655 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TMC8Q8IU68 726 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 RETREG2Q8NC44 543 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TTC9Q92623 222 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 MAML3Q96JK9 1138 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 PURBQ96QR8 312 aaKnown RBP4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 MYD88Q99836 296 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TMEM9BQ9NQ34 198 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 VPS45Q9NRW7 570 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TRMT13Q9NUP7 481 aaKnown RBP4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 USP40Q9NVE5 1235 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TMOD2Q9NZR1 351 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 POLKQ9UBT6 870 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TTF2Q9UNY4 1162 aaKnown RBP4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 USTQ9Y2C2 406 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 DOCK2Q92608 1830 aa4.23□□□□□ -1.73
SCARNA13-201ENST00000516672 TET1Q8NFU7 2136 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 KANSL1LA0AUZ9 987 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 VPS37CA5D8V6 355 aaPredicted RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 TRABD2BA6NFA1 517 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 C2CD2LO14523 706 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 RRP8O43159 456 aaKnown RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 EOMESO95936 686 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 WEE2P0C1S8 567 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 SRGAP2BP0DMP2 458 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 HOXA7P31268 230 aaPredicted RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 MPLP40238 635 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 CCT4P50991 539 aaKnown RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 STARD6P59095 220 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 FKBP1AP62942 108 aaKnown RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 FAM193AP78312 1265 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 TEFQ10587 303 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 UBXN2BQ14CS0 331 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 PPP1R26Q5T8A7 1209 aaPredicted RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 XRRA1Q6P2D8 792 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 CXCL17Q6UXB2 119 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 MYOCDQ8IZQ8 938 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 RSAD2Q8WXG1 361 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 ADAMTS14Q8WXS8 1223 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 ALDH8A1Q9H2A2 487 aaPredicted RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 CD209Q9NNX6 404 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 SIPA1L3O60292 1781 aaPredicted RBP4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 DENND4AQ7Z401 1863 aa4.22□□□□□ -1.73
SCARNA13-201ENST00000516672 LNP1A1A4G5 178 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 FAM170BA6NMN3 283 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 CHURC1-FNTBB4DL54 471 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 PITPNM1O00562 1244 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 CDX4O14627 284 aaPredicted RBP4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 DUSP11O75319 330 aaKnown RBP4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 NADKO95544 446 aaPredicted RBP4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SUPT20HL2P0C7V6 817 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 CNR2P34972 360 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 FNTBP49356 437 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 PSMC6P62333 389 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 MTAPQ13126 283 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 IKBKEQ14164 716 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 GPNMBQ14956 572 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 PROSER3Q2NL68 480 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SULT6B1Q6IMI4 303 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 CES5AQ6NT32 575 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 LLGL2Q6P1M3 1020 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 TMEM184AQ6ZMB5 413 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 PNPLA1Q8N8W4 532 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 ZNF280CQ8ND82 737 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SPATA20Q8TB22 786 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 ACSF2Q96CM8 615 aaPredicted RBP4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 CDCA7LQ96GN5 454 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SHDQ96IW2 340 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 LOXL4Q96JB6 756 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 PUS7Q96PZ0 661 aaKnown RBP4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 MYADMQ96S97 322 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SEZ6LQ9BYH1 1024 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SIL1Q9H173 461 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 CSRNP2Q9H175 543 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SPC25Q9HBM1 224 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 TMPRSS4Q9NRS4 437 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 SLC5A4Q9NY91 659 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 IGSF9Q9P2J2 1179 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 DBR1Q9UK59 544 aaKnown RBP4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 PLAGL2Q9UPG8 496 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 RABGAP1Q9Y3P9 1069 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 DOCK1Q14185 1865 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 BSNQ9UPA5 3926 aa4.21□□□□□ -1.74
SCARNA13-201ENST00000516672 APCP25054 2843 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms