RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 COA3Q9Y2R0 106 aaPredicted RBP4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SIT1Q9Y3P8 196 aa4.28□□□□□ -1.72
SCARNA16.2-201ENST00000516520 UNCXA6NJT0 531 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SGSM2O43147 1006 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SUSD5O60279 629 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SCG5P05408 212 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SNRPB2P08579 225 aaKnown RBP4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 RPL13P26373 211 aaKnown RBP4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CNR2P34972 360 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 THBS2P35442 1172 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 NFKB2Q00653 900 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CHRNA2Q15822 529 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ZNF827Q17R98 1081 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 INF2Q27J81 1249 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SV2CQ496J9 727 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ACBD5Q5T8D3 534 aaPredicted RBP4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 LARP1BQ659C4 914 aaKnown RBP4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ZNF227Q86WZ6 799 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ZNF761Q86XN6 746 aaPredicted RBP4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FAM178BQ8IXR5 827 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FAM126BQ8IXS8 530 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TTLL6Q8N841 843 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ADAMTS17Q8TE56 1095 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FRS2Q8WU20 508 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 BTN2A2Q8WVV5 523 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 GORASP1Q9BQQ3 440 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 C11orf84Q9BUA3 381 aaPredicted RBP4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KRTAP4-5Q9BYR2 181 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PRKAG3Q9UGI9 489 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PALD1Q9ULE6 856 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 JAG2Q9Y219 1238 aa4.27□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ITGAVP06756 1048 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FPR2P25090 351 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ERCC5P28715 1186 aaPredicted RBP4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KIAA2012Q0VF49 1180 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 SMAD4Q13485 552 aaKnown RBP4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TESK1Q15569 626 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FXNQ16595 210 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FAM26FQ5R3K3 315 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CD300LDQ6UXZ3 194 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MILR1Q7Z6M3 343 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FERMT3Q86UX7 667 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FAM124AQ86V42 546 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TRMT2BQ96GJ1 504 aaKnown RBP4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TMEM169Q96HH4 297 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 YIPF4Q9BSR8 244 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 EPN3Q9H201 632 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ZNF652Q9Y2D9 606 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 X6R8D5 127 aa4.26□□□□□ -1.73
SCARNA16.2-201ENST00000516520 H7BY64 318 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 AGRPO00253 132 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 DDAH1O94760 285 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 LTBRP36941 435 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ECI1P42126 302 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CYP4F3Q08477 520 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 BORAQ6PGQ7 559 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CEP68Q76N32 757 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PPIL6Q8IXY8 311 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 DDX1Q92499 740 aaKnown RBP4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MRVI1Q9Y6F6 885 aa4.25□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CYP7B1O75881 506 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ITGB3P05106 788 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 BCL6P41182 706 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KCNJ6P48051 423 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 GFRA1P56159 465 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ITGA1P56199 1179 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 NKX3-2P78367 333 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 LSAMPQ13449 338 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 RGL3Q3MIN7 710 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 HHIPL2Q6UWX4 724 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 EEPD1Q7L9B9 569 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 NLRP10Q86W26 655 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CCDC103Q8IW40 242 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 LGI4Q8N135 537 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 WRNIP1Q96S55 665 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 LGR4Q9BXB1 951 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 DUSP10Q9Y6W6 482 aa4.24□□□□□ -1.73
SCARNA16.2-201ENST00000516520 B2RBV5 119 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 HGSO14964 777 aaPredicted RBP4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TBX1O43435 398 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MAFKO60675 156 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MAGEA10P43363 369 aaPredicted RBP4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 ZXDCQ2QGD7 858 aaPredicted RBP4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 EMC4Q5J8M3 183 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 FAM26EQ8N5C1 309 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TTC9BQ8N6N2 239 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 KREMEN2Q8NCW0 462 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 RCBTB1Q8NDN9 531 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 CHAMP1Q96JM3 812 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 GPR20Q99678 358 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 EPB41L1Q9H4G0 881 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 TMEFF2Q9UIK5 374 aaPredicted RBP4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 R3HCC1Q9Y3T6 440 aaKnown RBP4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PCDHB4Q9Y5E5 795 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 PCDHA2Q9Y5H9 948 aa4.23□□□□□ -1.73
SCARNA16.2-201ENST00000516520 MROH6A6NGR9 719 aa4.22□□□□□ -1.73
SCARNA16.2-201ENST00000516520 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms