RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 NAT10Q9H0A0 1025 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 DNAJC25Q9H1X3 360 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CUEDC2Q9H467 287 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 GBA2Q9HCG7 927 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 NMRK2Q9NPI5 230 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 DISC1Q9NRI5 854 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 AGTPBP1Q9UPW5 1226 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RIPK3Q9Y572 518 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RPTORQ8N122 1335 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 IGLV3-22A0A075B6J6 115 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 POTEMA6NI47 508 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 BIN1O00499 593 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SLC26A4O43511 780 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CELF2O95319 508 aaKnown RBP8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 OSBPP22059 807 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 AFMP43652 599 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ZNF165P49910 485 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 UBXN2AP68543 259 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SETQ01105 290 aaPredicted RBP8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 BAATQ14032 418 aaPredicted RBP8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CEP55Q53EZ4 464 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SLC30A10Q6XR72 485 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 LBX2Q6XYB7 198 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PLA2G4DQ86XP0 818 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 GRAMD1CQ8IYS0 662 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ETNPPLQ8TBG4 499 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SNX29Q8TEQ0 813 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 LENG9Q96B70 501 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ACAD9Q9H845 621 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MAGEF1Q9HAY2 307 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 COL20A1Q9P218 1284 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PCDHA5Q9Y5H7 936 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 LCTP09848 1927 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KIAA1217Q5T5P2 1943 aa8.6□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FRMPD4Q14CM0 1322 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KDM3AQ9Y4C1 1321 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 LOXHD1Q8IVV2 1947 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 A0A087WWV3 80 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MSH4O15457 936 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 GTPBP6O43824 516 aaPredicted RBP8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PLCG1P19174 1290 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 GJA5P36382 358 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 HERVK_113P62684 666 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 DPYDQ12882 1025 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MOGSQ13724 837 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 DPCR1Q3MIW9 517 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 NAALADL2Q58DX5 795 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 NT5DC1Q5TFE4 455 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PCNX4Q63HM2 1172 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CHADLQ6NUI6 762 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 C11orf57Q6ZUT1 292 aaPredicted RBP8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RIOX2Q8IUF8 465 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TRIML1Q8N9V2 468 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CHST13Q8NET6 341 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ERMNQ8TAM6 284 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CYP2W1Q8TAV3 490 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 GJA10Q969M2 543 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TAAR1Q96RJ0 339 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 UIMC1Q96RL1 719 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RMDN3Q96TC7 470 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PLIN2Q99541 437 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MXRA8Q9BRK3 442 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PAGR1Q9BTK6 254 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MMTAG2Q9BU76 263 aaKnown RBP8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CBX8Q9HC52 389 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 STK17AQ9UEE5 414 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FBXO40Q9UH90 709 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MAN1B1Q9UKM7 699 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ZNFX1Q9P2E3 1918 aaKnown RBP8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 BECN2A8MW95 431 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GOLGA6L19H0YKK7 550 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MEIS1O00470 390 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 MYL1P05976 194 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CETPP11597 493 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 EIF2AK2P19525 551 aaKnown RBP8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 CCT6AP40227 531 aaKnown RBP8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SARSP49591 514 aaKnown RBP8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GTF2A2P52657 109 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 AMPD3Q01432 767 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GRB10Q13322 594 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 LRCH2Q5VUJ6 765 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ARHGEF16Q5VV41 709 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 HAUS3Q68CZ6 603 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 ISM2Q6H9L7 571 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 XRRA1Q6P2D8 792 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 NIPA1Q7RTP0 329 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 IL31RAQ8NI17 732 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SPATA20Q8TB22 786 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 STAMQ92783 540 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SLC5A5Q92911 643 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 GSDMAQ96QA5 445 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 BPIFA3Q9BQP9 254 aa8.58□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PDCD2LQ9BRP1 358 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms