RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 ZNF34Q8IZ26 560 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 STK35Q8TDR2 534 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 GAL3ST3Q96A11 431 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 SYAP1Q96A49 352 aaPredicted RBP9.62□□□□□ -0.87
SFXN1-211ENST00000515736 FAM227BQ96M60 508 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 FANCLQ9NW38 375 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
SFXN1-211ENST00000515736 RIC1Q4ADV7 1423 aa9.62□□□□□ -0.87
SFXN1-211ENST00000515736 MROH5Q6ZUA9 1318 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 LTBP3Q9NS15 1303 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 AXIN1O15169 862 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 PDPK1O15530 556 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
SFXN1-211ENST00000515736 DDNO94850 711 aaPredicted RBP9.61□□□□□ -0.87
SFXN1-211ENST00000515736 SRGNP10124 158 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 FGFR3P22607 806 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 ZNF445P59923 1031 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 IFRD2Q12894 506 aaPredicted RBP9.61□□□□□ -0.87
SFXN1-211ENST00000515736 RASGRF1Q13972 1273 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 CCDC93Q567U6 631 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 CEP135Q66GS9 1140 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 LLGL2Q6P1M3 1020 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 CRIPAKQ8N1N5 446 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 FBXL16Q8N461 479 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 CCDC155Q8N6L0 562 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 GRIN3AQ8TCU5 1115 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 ZNF837Q96EG3 531 aaPredicted RBP9.61□□□□□ -0.87
SFXN1-211ENST00000515736 NEUROD6Q96NK8 337 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.61□□□□□ -0.872e-6■□□□□ 11.2
SFXN1-211ENST00000515736 RBSNQ9H1K0 784 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 LMBRD1Q9NUN5 540 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 DNAJB12Q9NXW2 375 aaKnown RBP9.61□□□□□ -0.87
SFXN1-211ENST00000515736 CTNNA3Q9UI47 895 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 SOX13Q9UN79 622 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 MAPK8IP1Q9UQF2 711 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 COL4A3BPQ9Y5P4 624 aa9.61□□□□□ -0.87
SFXN1-211ENST00000515736 IQCA1LA6NCM1 817 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 RNF113AO15541 343 aaKnown RBP9.6□□□□□ -0.87
SFXN1-211ENST00000515736 UQCRFS1P1P0C7P4 283 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 EIF2AK2P19525 551 aaKnown RBP9.6□□□□□ -0.87
SFXN1-211ENST00000515736 ARNTP27540 789 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 TTC39AQ5SRH9 613 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 GORABQ5T7V8 394 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 MCTP1Q6DN14 999 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 CLEC4GQ6UXB4 293 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 VN1R5Q7Z5H4 357 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 LSRQ86X29 649 aaPredicted RBP9.6□□□□□ -0.87
SFXN1-211ENST00000515736 TTLL11Q8NHH1 800 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 APPBP2Q92624 585 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 TNKS2Q9H2K2 1166 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 IGFLR1Q9H665 355 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 EHMT1Q9H9B1 1298 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
SFXN1-211ENST00000515736 ZDHHC9Q9Y397 364 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 PRKAB1Q9Y478 270 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 KIF3AQ9Y496 699 aa9.6□□□□□ -0.87
SFXN1-211ENST00000515736 WDR19Q8NEZ3 1342 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 MYH13Q9UKX3 1938 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 ESYT3A0FGR9 886 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
SFXN1-211ENST00000515736 STX6O43752 255 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 DNAJC6O75061 913 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 BPNT1O95861 308 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 ZSCAN22P10073 491 aaPredicted RBP9.59□□□□□ -0.87
SFXN1-211ENST00000515736 NPR1P16066 1061 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 FXNQ16595 210 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 ADAMTSL4Q6UY14 1074 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 MICAL1Q8TDZ2 1067 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 GTPBP3Q969Y2 492 aaKnown RBP9.59□□□□□ -0.87
SFXN1-211ENST00000515736 NEK1Q96PY6 1258 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 LLPHQ9BRT6 129 aaKnown RBP9.59□□□□□ -0.87
SFXN1-211ENST00000515736 EMILIN2Q9BXX0 1053 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 ADAM19Q9H013 955 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 SPC25Q9HBM1 224 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 TRMT112Q9UI30 125 aaKnown RBP9.59□□□□□ -0.87
SFXN1-211ENST00000515736 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 RIPOR2Q9Y4F9 1068 aa9.59□□□□□ -0.87
SFXN1-211ENST00000515736 DGAT1O75907 488 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 LETM1O95202 739 aaPredicted RBP9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ITGA6P23229 1130 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 RPL6Q02878 288 aaKnown RBP9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ZNF252P-AS1Q0IIN9 211 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ADCK5Q3MIX3 580 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 LRRC24Q50LG9 513 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 METTL24Q5JXM2 366 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 SCARA3Q6AZY7 606 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
SFXN1-211ENST00000515736 LDHAL6AQ6ZMR3 332 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 ZNF589Q86UQ0 364 aaPredicted RBP9.58□□□□□ -0.88
SFXN1-211ENST00000515736 LDHDQ86WU2 507 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 HOMER1Q86YM7 354 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 FAM89AQ96GI7 184 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 AGXT2Q9BYV1 514 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
SFXN1-211ENST00000515736 GRPEL1Q9HAV7 217 aa9.58□□□□□ -0.88
SFXN1-211ENST00000515736 CBX8Q9HC52 389 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms