RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
CDK7-212ENST00000515180 AFG1LQ8WV93 481 aa15.09■□□□□ 0.01
CDK7-212ENST00000515180 TRPV6Q9H1D0 765 aa15.09■□□□□ 0.01
CDK7-212ENST00000515180 POLR3EQ9NVU0 708 aa15.09■□□□□ 0.01
CDK7-212ENST00000515180 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
CDK7-212ENST00000515180 DDX41Q9UJV9 622 aaKnown RBP15.09■□□□□ 0.01
CDK7-212ENST00000515180 NAP1L2Q9ULW6 460 aaPredicted RBP15.09■□□□□ 0.01
CDK7-212ENST00000515180 MROH7Q68CQ1 1323 aa15.09■□□□□ 0.01
CDK7-212ENST00000515180 A6NJR5 290 aa15.08■□□□□ 0
CDK7-212ENST00000515180 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0
CDK7-212ENST00000515180 B4GALT4O60513 344 aa15.08■□□□□ 0
CDK7-212ENST00000515180 GH1P01241 217 aa15.08■□□□□ 0
CDK7-212ENST00000515180 CD4P01730 458 aa15.08■□□□□ 0
CDK7-212ENST00000515180 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
CDK7-212ENST00000515180 CHMP4BP1P59074 171 aa15.08■□□□□ 0
CDK7-212ENST00000515180 APOBRQ0VD83 1088 aa15.08■□□□□ 0
CDK7-212ENST00000515180 LRIT3Q3SXY7 679 aa15.08■□□□□ 0
CDK7-212ENST00000515180 Q6ZUG5 572 aa15.08■□□□□ 0
CDK7-212ENST00000515180 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
CDK7-212ENST00000515180 SAMD3Q8N6K7 520 aa15.08■□□□□ 0
CDK7-212ENST00000515180 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
CDK7-212ENST00000515180 MTG1Q9BT17 334 aaPredicted RBP15.08■□□□□ 0
CDK7-212ENST00000515180 MRVI1Q9Y6F6 885 aa15.08■□□□□ 0
CDK7-212ENST00000515180 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
CDK7-212ENST00000515180 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
CDK7-212ENST00000515180 MEIS2O14770 477 aa15.07■□□□□ 0
CDK7-212ENST00000515180 ZBTB43O43298 467 aa15.07■□□□□ 0
CDK7-212ENST00000515180 REC8O95072 547 aa15.07■□□□□ 0
CDK7-212ENST00000515180 TIMP1P01033 207 aa15.07■□□□□ 0
CDK7-212ENST00000515180 MMP3P08254 477 aa15.07■□□□□ 0
CDK7-212ENST00000515180 CDC27P30260 824 aa15.07■□□□□ 0
CDK7-212ENST00000515180 CCND2P30279 289 aa15.07■□□□□ 0
CDK7-212ENST00000515180 FGD1P98174 961 aa15.07■□□□□ 0
CDK7-212ENST00000515180 RTN1Q16799 776 aa15.07■□□□□ 0
CDK7-212ENST00000515180 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
CDK7-212ENST00000515180 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
CDK7-212ENST00000515180 SMARCC2Q8TAQ2 1214 aa15.07■□□□□ 0
CDK7-212ENST00000515180 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
CDK7-212ENST00000515180 FAM217BQ9NTX9 383 aaPredicted RBP15.07■□□□□ 0
CDK7-212ENST00000515180 RTEL1Q9NZ71 1219 aa15.07■□□□□ 0
CDK7-212ENST00000515180 UMODL1Q5DID0 1318 aa15.07■□□□□ 0
CDK7-212ENST00000515180 CNTNAP5Q8WYK1 1306 aa15.07■□□□□ 0
CDK7-212ENST00000515180 MYH7BA7E2Y1 1941 aa15.07■□□□□ 0
CDK7-212ENST00000515180 DNAH12Q6ZR08 3092 aa15.07■□□□□ 0
CDK7-212ENST00000515180 HMGB1P09429 215 aaKnown RBP15.06■□□□□ 0
CDK7-212ENST00000515180 CYP2C18P33260 490 aa15.06■□□□□ 0
CDK7-212ENST00000515180 MRPS9P82933 396 aaKnown RBP15.06■□□□□ 0
CDK7-212ENST00000515180 SP2Q02086 613 aa15.06■□□□□ 0
CDK7-212ENST00000515180 FPGSQ05932 587 aa15.06■□□□□ 0
CDK7-212ENST00000515180 FUT2Q10981 343 aa15.06■□□□□ 0
CDK7-212ENST00000515180 UBE2SQ16763 222 aa15.06■□□□□ 0
CDK7-212ENST00000515180 BRDTQ58F21 947 aaPredicted RBP15.06■□□□□ 0
CDK7-212ENST00000515180 FAM47CQ5HY64 1035 aa15.06■□□□□ 0
CDK7-212ENST00000515180 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
CDK7-212ENST00000515180 HEATR3Q7Z4Q2 680 aa15.06■□□□□ 0
CDK7-212ENST00000515180 BRF1Q92994 677 aa15.06■□□□□ 0
CDK7-212ENST00000515180 CUL5Q93034 780 aa15.06■□□□□ 0
CDK7-212ENST00000515180 TRMT13Q9NUP7 481 aaKnown RBP15.06■□□□□ 0
CDK7-212ENST00000515180 ACRP10323 421 aa15.05■□□□□ -0
CDK7-212ENST00000515180 CYP2C9P11712 490 aa15.05■□□□□ -0
CDK7-212ENST00000515180 CSF2RAP15509 400 aa15.05■□□□□ -0
CDK7-212ENST00000515180 CASTP20810 708 aaKnown RBP15.05■□□□□ -0
CDK7-212ENST00000515180 RPS6KB1P23443 525 aa15.05■□□□□ -0
CDK7-212ENST00000515180 WWC2Q6AWC2 1192 aa15.05■□□□□ -0
CDK7-212ENST00000515180 MFSD5Q6N075 450 aa15.05■□□□□ -0
CDK7-212ENST00000515180 Q7L0L9 218 aa15.05■□□□□ -0
CDK7-212ENST00000515180 DHX37Q8IY37 1157 aaKnown RBP15.05■□□□□ -0
CDK7-212ENST00000515180 USP26Q9BXU7 913 aa15.05■□□□□ -0
CDK7-212ENST00000515180 ALDH8A1Q9H2A2 487 aaPredicted RBP15.05■□□□□ -0
CDK7-212ENST00000515180 PSTPIP2Q9H939 334 aa15.05■□□□□ -0
CDK7-212ENST00000515180 RBM28Q9NW13 759 aaKnown RBP15.05■□□□□ -0
CDK7-212ENST00000515180 V9GY48 417 aaPredicted RBP15.05■□□□□ -0
CDK7-212ENST00000515180 SCN10AQ9Y5Y9 1956 aa15.04■□□□□ -0
CDK7-212ENST00000515180 FRMPD4Q14CM0 1322 aa15.04■□□□□ -0
CDK7-212ENST00000515180 KPNA6O60684 536 aa15.04■□□□□ -0
CDK7-212ENST00000515180 GGPS1O95749 300 aa15.04■□□□□ -0
CDK7-212ENST00000515180 ADD1P35611 737 aaKnown RBP15.04■□□□□ -0
CDK7-212ENST00000515180 CCL23P55773 120 aa15.04■□□□□ -0
CDK7-212ENST00000515180 TYW1BQ6NUM6 668 aa15.04■□□□□ -0
CDK7-212ENST00000515180 C16orf59Q7L2K0 433 aa15.04■□□□□ -0
CDK7-212ENST00000515180 KAT2BQ92831 832 aa15.04■□□□□ -0
CDK7-212ENST00000515180 HIPK3Q9H422 1215 aa15.04■□□□□ -0
CDK7-212ENST00000515180 RBAK-RBAKDNI3L0D1 243 aa15.03■□□□□ -0
CDK7-212ENST00000515180 PIK3CDO00329 1044 aa15.03■□□□□ -0
CDK7-212ENST00000515180 PPFIA3O75145 1194 aa15.03■□□□□ -0
CDK7-212ENST00000515180 ZNF286BP0CG31 522 aa15.03■□□□□ -0
CDK7-212ENST00000515180 UBA1P22314 1058 aaKnown RBP15.03■□□□□ -0
CDK7-212ENST00000515180 SEMA3FQ13275 785 aa15.03■□□□□ -0
CDK7-212ENST00000515180 LAMC2Q13753 1193 aa15.03■□□□□ -0
CDK7-212ENST00000515180 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
CDK7-212ENST00000515180 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
CDK7-212ENST00000515180 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.03■□□□□ -0
CDK7-212ENST00000515180 LARP6Q9BRS8 491 aaKnown RBP15.03■□□□□ -0
CDK7-212ENST00000515180 ALG1Q9BT22 464 aa15.03■□□□□ -0
CDK7-212ENST00000515180 NOC4LQ9BVI4 516 aaKnown RBP15.03■□□□□ -0
CDK7-212ENST00000515180 WNT8AQ9H1J5 351 aa15.03■□□□□ -0
CDK7-212ENST00000515180 DOCK5Q9H7D0 1870 aa15.02■□□□□ -0
CDK7-212ENST00000515180 PSMA5P28066 241 aa15.02■□□□□ -0
CDK7-212ENST00000515180 METAP2P50579 478 aaKnown RBP eCLIP15.02■□□□□ -0
CDK7-212ENST00000515180 NAPAP54920 295 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms