RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 HDAC1Q13547 482 aaPredicted RBP26.73■■□□□ 1.87
SMAD1-214ENST00000514831 GPNMBQ14956 572 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 SEPT14Q6ZU15 432 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 PNMA1Q8ND90 353 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 DHX38Q92620 1227 aaKnown RBP26.73■■□□□ 1.87
SMAD1-214ENST00000514831 TAAR1Q96RJ0 339 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 IWS1Q96ST2 819 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 GTF2IRD1Q9UHL9 959 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 SIP14410 1827 aa26.73■■□□□ 1.87
SMAD1-214ENST00000514831 LPXNO60711 386 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 CXCL10P02778 98 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 PLA2G5P39877 138 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 STXBP2Q15833 593 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 CNKSR3Q6P9H4 555 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 SPRED2Q7Z698 418 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 MCF2L2Q86YR7 1114 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 TBC1D5Q92609 795 aa26.72■■□□□ 1.87
SMAD1-214ENST00000514831 RRP1P56182 461 aaKnown RBP26.71■■□□□ 1.87
SMAD1-214ENST00000514831 DGKDQ16760 1214 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 ASPRV1Q53RT3 343 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 CCDC178Q5BJE1 867 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 IQCA1Q86XH1 822 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 ADGRF4Q8IZF3 695 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 HLA-CQ95604 372 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 EMID1Q96A84 441 aaPredicted RBP26.71■■□□□ 1.87
SMAD1-214ENST00000514831 RMDN3Q96TC7 470 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 MYH7BA7E2Y1 1941 aa26.71■■□□□ 1.87
SMAD1-214ENST00000514831 LCHNA4D1U4 455 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 TRIM6-TRIM34B2RNG4 842 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 DEFB103AP81534 67 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 CHST3Q7LGC8 479 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 ANKS1AQ92625 1134 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 KATNAL1Q9BW62 490 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 KAT14Q9H8E8 782 aa26.7■■□□□ 1.86
SMAD1-214ENST00000514831 ZNF213O14771 459 aa26.69■■□□□ 1.86
SMAD1-214ENST00000514831 NBNO60934 754 aa26.69■■□□□ 1.86
SMAD1-214ENST00000514831 CKBP12277 381 aa26.69■■□□□ 1.86
SMAD1-214ENST00000514831 QRICH1Q2TAL8 776 aa26.69■■□□□ 1.86
SMAD1-214ENST00000514831 BRWD1Q9NSI6 2320 aa26.69■■□□□ 1.86
SMAD1-214ENST00000514831 LMCD1Q9NZU5 365 aa26.69■■□□□ 1.86
SMAD1-214ENST00000514831 DDX41Q9UJV9 622 aaKnown RBP26.69■■□□□ 1.86
SMAD1-214ENST00000514831 MRPL11Q9Y3B7 192 aaKnown RBP26.69■■□□□ 1.86
SMAD1-214ENST00000514831 KDM4AO75164 1064 aa26.68■■□□□ 1.86
SMAD1-214ENST00000514831 F2P00734 622 aa26.68■■□□□ 1.86
SMAD1-214ENST00000514831 TMCO2Q7Z6W1 182 aaPredicted RBP26.68■■□□□ 1.86
SMAD1-214ENST00000514831 C7orf31Q8N865 590 aa26.68■■□□□ 1.86
SMAD1-214ENST00000514831 RILPL2Q969X0 211 aa26.68■■□□□ 1.86
SMAD1-214ENST00000514831 ZBED2Q9BTP6 218 aa26.68■■□□□ 1.86
SMAD1-214ENST00000514831 HDAC6Q9UBN7 1215 aa26.68■■□□□ 1.86
SMAD1-214ENST00000514831 ABHD14A-ACY1A0A1B0GW23 586 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 GJB5O95377 273 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 SDSP20132 328 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 PSEN2P49810 448 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 ARHGEF16Q5VV41 709 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 FBXO11Q86XK2 927 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 PPTC7Q8NI37 304 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 GDPD5Q8WTR4 605 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 CRBNQ96SW2 442 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 PXMP2Q9NR77 195 aa26.67■■□□□ 1.86
SMAD1-214ENST00000514831 HAS3O00219 553 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 EFCAB14O75071 495 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 EIF3JO75822 258 aaKnown RBP26.66■■□□□ 1.86
SMAD1-214ENST00000514831 EIF2AK2P19525 551 aaKnown RBP26.66■■□□□ 1.86
SMAD1-214ENST00000514831 PTK7Q13308 1070 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 MFSD10Q14728 455 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 TCTN1Q2MV58 587 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 ENAHQ8N8S7 591 aaPredicted RBP26.66■■□□□ 1.86
SMAD1-214ENST00000514831 FAM122AQ96E09 287 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 ZSCAN10Q96SZ4 725 aaPredicted RBP26.66■■□□□ 1.86
SMAD1-214ENST00000514831 LNPKQ9C0E8 428 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 MRVI1Q9Y6F6 885 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 MICAL3Q7RTP6 2002 aa26.66■■□□□ 1.86
SMAD1-214ENST00000514831 B4E1Z4 1266 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 PARP1P09874 1014 aaKnown RBP26.65■■□□□ 1.86
SMAD1-214ENST00000514831 ZNF286BP0CG31 522 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 HOXD8P13378 290 aaPredicted RBP26.65■■□□□ 1.86
SMAD1-214ENST00000514831 GHRHRQ02643 423 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 LAMC2Q13753 1193 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 KIAA0753Q2KHM9 967 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 TRIM71Q2Q1W2 868 aaKnown RBP26.65■■□□□ 1.86
SMAD1-214ENST00000514831 RAD9AQ99638 391 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 ALG1Q9BT22 464 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 JMJD4Q9H9V9 463 aa26.65■■□□□ 1.86
SMAD1-214ENST00000514831 DHX16O60231 1041 aaKnown RBP26.64■■□□□ 1.86
SMAD1-214ENST00000514831 NR3C2P08235 984 aa26.64■■□□□ 1.86
SMAD1-214ENST00000514831 ERVK-21P61565 698 aa26.64■■□□□ 1.86
SMAD1-214ENST00000514831 TRAF7Q6Q0C0 670 aa26.64■■□□□ 1.86
SMAD1-214ENST00000514831 OPLAHO14841 1288 aa26.63■■□□□ 1.85
SMAD1-214ENST00000514831 HSD17B4P51659 736 aa26.63■■□□□ 1.85
SMAD1-214ENST00000514831 TGS1Q96RS0 853 aaKnown RBP26.63■■□□□ 1.85
SMAD1-214ENST00000514831 EPHX3Q9H6B9 360 aa26.63■■□□□ 1.85
SMAD1-214ENST00000514831 SUGCTQ9HAC7 445 aa26.63■■□□□ 1.85
SMAD1-214ENST00000514831 LINC01553A4QN01 128 aa26.62■■□□□ 1.85
SMAD1-214ENST00000514831 CFBP00751 764 aa26.62■■□□□ 1.85
SMAD1-214ENST00000514831 IKBKEQ14164 716 aa26.62■■□□□ 1.85
SMAD1-214ENST00000514831 ZNF618Q5T7W0 954 aa26.62■■□□□ 1.85
SMAD1-214ENST00000514831 DHX37Q8IY37 1157 aaKnown RBP26.62■■□□□ 1.85
SMAD1-214ENST00000514831 WNT8BQ93098 351 aa26.62■■□□□ 1.85
SMAD1-214ENST00000514831 AMNQ9BXJ7 453 aa26.62■■□□□ 1.85
SMAD1-214ENST00000514831 ZSWIM5Q9P217 1185 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms