RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 SF3B3Q15393 1217 aaKnown RBP7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CCNG2Q16589 344 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 TMTC4Q5T4D3 741 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 ANO1Q5XXA6 986 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 PHLDB3Q6NSJ2 640 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 SYTL1Q8IYJ3 562 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 GOLM1Q8NBJ4 401 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 DEPTORQ8TB45 409 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 FAM20AQ96MK3 541 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 HERC2P3Q9BVR0 1158 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 UBE2OQ9C0C9 1292 aaKnown RBP7.98□□□□□ -1.13
NIPBL-208ENST00000514335 DBNDD1Q9H9R9 158 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 ZCCHC17Q9NP64 241 aaKnown RBP7.98□□□□□ -1.13
NIPBL-208ENST00000514335 STARD7Q9NQZ5 370 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 IPPQ9Y573 584 aa7.98□□□□□ -1.13
NIPBL-208ENST00000514335 IBTKQ9P2D0 1353 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 H0YC42 278 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 APBB3O95704 486 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 PBLDP30039 288 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 MYL6P60660 151 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 NFIAQ12857 509 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 CUL3Q13618 768 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 GNA13Q14344 377 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 RAB3GAP1Q15042 981 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 FAM133BQ5BKY9 247 aaKnown RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 FBXO31Q5XUX0 539 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 NUGGCQ68CJ6 796 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 HIBCHQ6NVY1 386 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 FBXO38Q6PIJ6 1188 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 SLC2A7Q6PXP3 512 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 RAPH1Q70E73 1250 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 BRINP3Q76B58 766 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 ANKRD42Q8N9B4 389 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 TEX13BQ9BXU2 312 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 YIPF3Q9GZM5 350 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 ACBD3Q9H3P7 528 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 FBXO10Q9UK96 956 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 TRIM43BA6NCK2 446 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 HDAC3O15379 428 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 ASAP2O43150 1006 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 PLIN1O60240 522 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 FERP16591 822 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 DNAJB1P25685 340 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 DPYSQ14117 519 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 COLGALT2Q8IYK4 626 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 IPMKQ8NFU5 416 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 OR8H1Q8NGG4 311 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 GDAP1Q8TB36 358 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 ATP6V1E2Q96A05 226 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 COG8Q96MW5 612 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 MTMR9Q96QG7 549 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 OSBPL9Q96SU4 736 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
NIPBL-208ENST00000514335 NIFKQ9BYG3 293 aaKnown RBP7.97□□□□□ -1.13
NIPBL-208ENST00000514335 C10orf71Q711Q0 1435 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 CHUKO15111 745 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 SLC8A3P57103 927 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 DSTNP60981 165 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 PI16Q6UXB8 463 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 INTS8Q75QN2 995 aaKnown RBP7.96□□□□□ -1.13
NIPBL-208ENST00000514335 C16orf45Q96MC5 204 aaPredicted RBP7.96□□□□□ -1.13
NIPBL-208ENST00000514335 CAPN10Q9HC96 672 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 PREBQ9HCU5 417 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 PGAP2Q9UHJ9 254 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 ZNF711Q9Y462 761 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 NHSQ6T4R5 1651 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 TULP4Q9NRJ4 1543 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 INSRP06213 1382 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 NPHP3Q7Z494 1330 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 MYPNQ86TC9 1320 aa7.96□□□□□ -1.13
NIPBL-208ENST00000514335 POTEFA5A3E0 1075 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 PLOD1Q02809 727 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-208ENST00000514335 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 ISM2Q6H9L7 571 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 BTNL9Q6UXG8 535 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 RNF10Q8N5U6 811 aaKnown RBP7.96□□□□□ -1.14
NIPBL-208ENST00000514335 CDC26Q8NHZ8 85 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 FATE1Q969F0 183 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 KATNAL1Q9BW62 490 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 SIL1Q9H173 461 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 ATP6V0A4Q9HBG4 840 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 GDPD2Q9HCC8 539 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 ZFYVE28Q9HCC9 887 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 EIF2B4Q9UI10 523 aaKnown RBP7.96□□□□□ -1.14
NIPBL-208ENST00000514335 R3HDM2Q9Y2K5 976 aaKnown RBP7.96□□□□□ -1.14
NIPBL-208ENST00000514335 FHOD1Q9Y613 1164 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 TACC3Q9Y6A5 838 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 GPRASP1Q5JY77 1395 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 NDC80O14777 642 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 TADA3O75528 432 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 TCEA3O75764 348 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 BCRP11274 1271 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 SFTPCP11686 197 aa7.96□□□□□ -1.14
NIPBL-208ENST00000514335 ATF3P18847 181 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 381.2 ms