RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 PRPF38AQ8NAV1 312 aaKnown RBP16.75■□□□□ 0.27
VCAN-211ENST00000513984 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 MYMKA6NI61 221 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 ZNF536O15090 1300 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 PPP1R2P41236 205 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 STIM1Q13586 685 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 ECM1Q16610 540 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 KCNK18Q7Z418 384 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 SCYL3Q8IZE3 742 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 CTAGE1Q96RT6 745 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 PPP2R3BQ9Y5P8 575 aa16.75■□□□□ 0.27
VCAN-211ENST00000513984 WDR90Q96KV7 1748 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 SFPQP23246 707 aaKnown RBP eCLIP16.74■□□□□ 0.27
VCAN-211ENST00000513984 CCT6AP40227 531 aaKnown RBP16.74■□□□□ 0.27
VCAN-211ENST00000513984 USP14P54578 494 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 PDE4DQ08499 809 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 NR1I3Q14994 352 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
VCAN-211ENST00000513984 UNC13DQ70J99 1090 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 FCHSD1Q86WN1 690 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 TBC1D5Q92609 795 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 EHMT1Q9H9B1 1298 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 LOXHD1Q8IVV2 1947 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
VCAN-211ENST00000513984 SSC5DA1L4H1 1573 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 PTPRFP10586 1907 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 IGLV3-22A0A075B6J6 115 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 PSMA7O14818 248 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 SKILP12757 684 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
VCAN-211ENST00000513984 SPAG1Q07617 926 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 HAUS3Q68CZ6 603 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 DHTKD1Q96HY7 919 aaPredicted RBP16.73■□□□□ 0.27
VCAN-211ENST00000513984 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 ADD3Q9UEY8 706 aaKnown RBP16.73■□□□□ 0.27
VCAN-211ENST00000513984 MAPK8IP1Q9UQF2 711 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 STK24Q9Y6E0 443 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 MSH4O15457 936 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 VCAM1P19320 739 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 HSD17B4P51659 736 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 GHRHRQ02643 423 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 TBX2Q13207 712 aaPredicted RBP16.73■□□□□ 0.27
VCAN-211ENST00000513984 MTMR2Q13614 643 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 FHDC1Q9C0D6 1143 aaPredicted RBP16.73■□□□□ 0.27
VCAN-211ENST00000513984 AS3MTQ9HBK9 375 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 SLC38A10Q9HBR0 1119 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 LIMA1Q9UHB6 759 aaKnown RBP16.73■□□□□ 0.27
VCAN-211ENST00000513984 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
VCAN-211ENST00000513984 LRRC10BA6NIK2 292 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 ZNF76P36508 570 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 EPS15P42566 896 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 STK4Q13043 487 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 SPECC1LQ69YQ0 1117 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
VCAN-211ENST00000513984 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 WRNIP1Q96S55 665 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 VAV3Q9UKW4 847 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
VCAN-211ENST00000513984 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 PITPNM2Q9BZ72 1349 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 PTPRAP18433 802 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 STAT3P40763 770 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 HIRAP54198 1017 aaPredicted RBP16.71■□□□□ 0.27
VCAN-211ENST00000513984 EHHADHQ08426 723 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 DGKZQ13574 1117 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 TTI2Q6NXR4 508 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 ERMNQ8TAM6 284 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 DDX12PQ92771 950 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 TANGO6Q9C0B7 1094 aa16.71■□□□□ 0.27
VCAN-211ENST00000513984 POTEB3A0JP26 581 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 TRIM49BA6NDI0 452 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 POTECB2RU33 542 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 COBLO75128 1261 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 MED24O75448 989 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 FCER1AP12319 257 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 CCNE1P24864 410 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 PBX1P40424 430 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 KCNJ6P48051 423 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 PMS1P54277 932 aaKnown RBP16.7■□□□□ 0.26
VCAN-211ENST00000513984 BACE1P56817 501 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 FILIP1LQ4L180 1135 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 TCP11X2Q5H9J9 407 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 POTEBQ6S5H4 581 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 CYP2W1Q8TAV3 490 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 UIMC1Q96RL1 719 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 PICK1Q9NRD5 415 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 KCND1Q9NSA2 647 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 RABGAP1Q9Y3P9 1069 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 NRDCO43847 1150 aa16.7■□□□□ 0.26
VCAN-211ENST00000513984 FLOT1O75955 427 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms