RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 CDC42EP5Q6NZY7 148 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 LMBR1LQ6UX01 489 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 SLCO4C1Q6ZQN7 724 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 FCHSD1Q86WN1 690 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 MICALL1Q8N3F8 863 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 TSR2Q969E8 191 aaKnown RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 TEKT1Q969V4 418 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 NXPE3Q969Y0 559 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 NECAB3Q96P71 396 aaPredicted RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 BHLHE41Q9C0J9 482 aaPredicted RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 RASSF4Q9H2L5 321 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 ABCB6Q9NP58 842 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 IFT57Q9NWB7 429 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 FRRS1LQ9P0K9 344 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 DAGLAQ9Y4D2 1042 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 AFG3L2Q9Y4W6 797 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 NCOR1O75376 2440 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 DOCK2Q92608 1830 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 F6X3S4 739 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 FOSL2P15408 326 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 PTPRAP18433 802 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 CYP2B6P20813 491 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 ZNF76P36508 570 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 ST13P50502 369 aaKnown RBP6.05□□□□□ -1.44
HTT-211ENST00000513326 ATP11AP98196 1134 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 HDLBPQ00341 1268 aaKnown RBP6.05□□□□□ -1.44
HTT-211ENST00000513326 FANCCQ00597 558 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 NEXNQ0ZGT2 675 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 MAP3K12Q12852 859 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 PERM1Q5SV97 790 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 CCDC30Q5VVM6 783 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 ELMSAN1Q6PJG2 1045 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 LDHAL6AQ6ZMR3 332 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 DTHD1Q6ZMT9 781 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 C3orf58Q8NDZ4 430 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 RNF34Q969K3 372 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 COA7Q96BR5 231 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 PLD4Q96BZ4 506 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 FAM122AQ96E09 287 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 CNNM1Q9NRU3 951 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 TMOD2Q9NZR1 351 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 PPM1HQ9ULR3 514 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 ADAMTS8Q9UP79 889 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 LOC285556D6RIA3 1793 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 RFX7Q2KHR2 1363 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 DNAH12Q6ZR08 3092 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 DOCK1Q14185 1865 aa6.05□□□□□ -1.44
HTT-211ENST00000513326 EPXP11678 715 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 ITPKAP23677 461 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 GRIA4P48058 902 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 EPHB4P54760 987 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 KRT76Q01546 638 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 CACNB2Q08289 660 aaPredicted RBP6.04□□□□□ -1.44
HTT-211ENST00000513326 RRP1BQ14684 758 aaKnown RBP6.04□□□□□ -1.44
HTT-211ENST00000513326 FAM110CQ1W6H9 321 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 SHROOM1Q2M3G4 852 aaPredicted RBP6.04□□□□□ -1.44
HTT-211ENST00000513326 LRRC24Q50LG9 513 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 FKBP1CQ5VVH2 108 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 CEP135Q66GS9 1140 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 SCYL3Q8IZE3 742 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 FAM151AQ8WW52 585 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 DNAAF4Q8WXU2 420 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 TTC9Q92623 222 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 KAZALD1Q96I82 304 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 HHIPQ96QV1 700 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 POP1Q99575 1024 aaKnown RBP6.04□□□□□ -1.44
HTT-211ENST00000513326 TXNRD2Q9NNW7 524 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 NAGPAQ9UK23 515 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 AGTPBP1Q9UPW5 1226 aa6.04□□□□□ -1.44
HTT-211ENST00000513326 BDP1A6H8Y1 2624 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 A0A096LPE4 126 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 A0A1W2PPZ6 126 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 DDTLA6NHG4 134 aaPredicted RBP6.03□□□□□ -1.44
HTT-211ENST00000513326 APAF1O14727 1248 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 ITGB8P26012 769 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 UBE4AQ14139 1066 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 MEI1Q5TIA1 1274 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 PSAPL1Q6NUJ1 521 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 FASTKD5Q7L8L6 764 aaKnown RBP6.03□□□□□ -1.44
HTT-211ENST00000513326 CACTIN-AS1Q8N1I8 211 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 VGLL2Q8N8G2 317 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 LINS1Q8NG48 757 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 ASAP3Q8TDY4 903 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 PPM1EQ8WY54 764 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 BSNDQ8WZ55 320 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 BADQ92934 168 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 ACDQ96AP0 544 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 LPIN3Q9BQK8 851 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 SENP6Q9GZR1 1112 aaPredicted RBP6.03□□□□□ -1.44
HTT-211ENST00000513326 SMG9Q9H0W8 520 aaKnown RBP6.03□□□□□ -1.44
HTT-211ENST00000513326 DDX4Q9NQI0 724 aaKnown RBP6.03□□□□□ -1.44
HTT-211ENST00000513326 FLRT1Q9NZU1 646 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 AKAP2Q9Y2D5 859 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 SLC45A1Q9Y2W3 748 aa6.03□□□□□ -1.44
HTT-211ENST00000513326 METTL12A8MUP2 240 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 RGS9O75916 674 aaPredicted RBP6.02□□□□□ -1.45
HTT-211ENST00000513326 PRDX5P30044 214 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 RGS3P49796 1198 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms