RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 ETNPPLQ8TBG4 499 aa10.6□□□□□ -0.71
DHFR-206ENST00000513048 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
DHFR-206ENST00000513048 HHIPL1Q96JK4 782 aa10.6□□□□□ -0.71
DHFR-206ENST00000513048 GZF1Q9H116 711 aaPredicted RBP10.6□□□□□ -0.71
DHFR-206ENST00000513048 CLSTN2Q9H4D0 955 aa10.6□□□□□ -0.71
DHFR-206ENST00000513048 DDX19AQ9NUU7 478 aaKnown RBP10.6□□□□□ -0.71
DHFR-206ENST00000513048 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
DHFR-206ENST00000513048 DDX25Q9UHL0 483 aaKnown RBP10.6□□□□□ -0.71
DHFR-206ENST00000513048 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
DHFR-206ENST00000513048 ASTN1O14525 1302 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
DHFR-206ENST00000513048 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 IGF2BP3O00425 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
DHFR-206ENST00000513048 MEIS1O00470 390 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 TBX3O15119 743 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 ZNF445P59923 1031 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 UBXN2AP68543 259 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
DHFR-206ENST00000513048 FSTL1Q12841 308 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 CALCRLQ16602 461 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 PCNX4Q63HM2 1172 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 DTHD1Q6ZMT9 781 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 IGSF22Q8N9C0 903 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 SHCBP1Q8NEM2 672 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
DHFR-206ENST00000513048 EPSTI1Q96J88 318 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 PDCD2LQ9BRP1 358 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 PAGR1Q9BTK6 254 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 EHMT1Q9H9B1 1298 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 PXMP2Q9NR77 195 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 MORF4L1Q9UBU8 362 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 FBXO40Q9UH90 709 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 KCNH3Q9ULD8 1083 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 UBIAD1Q9Y5Z9 338 aa10.59□□□□□ -0.71
DHFR-206ENST00000513048 MSH4O15457 936 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ZNF202O95125 648 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 SLC25A27O95847 323 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ITGB5P18084 799 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ERCC3P19447 782 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 COPB2P35606 906 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ERVK-9P63128 1117 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ERVK-24P63145 666 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 SPIRE1Q08AE8 756 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 PGM5Q15124 567 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 E2F4Q16254 413 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 PRR16Q569H4 304 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 NIPA1Q7RTP0 329 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
DHFR-206ENST00000513048 GJA10Q969M2 543 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 SYAP1Q96A49 352 aaPredicted RBP10.58□□□□□ -0.72
DHFR-206ENST00000513048 FGD4Q96M96 766 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 TIGD1Q96MW7 591 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 MMTAG2Q9BU76 263 aaKnown RBP10.58□□□□□ -0.72
DHFR-206ENST00000513048 CCSER1Q9C0I3 900 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 NUP62CLQ9H1M0 184 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ZCCHC17Q9NP64 241 aaKnown RBP10.58□□□□□ -0.72
DHFR-206ENST00000513048 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
DHFR-206ENST00000513048 ZNFX1Q9P2E3 1918 aaKnown RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 DNAJC25-GNG10A0A024R161 153 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 PP2D1A8MPX8 630 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 ACTN4O43707 911 aaKnown RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 BCRP11274 1271 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 EIF2AK2P19525 551 aaKnown RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 CDC25AP30304 524 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 TECP42680 631 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 TXKP42681 527 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 SYKP43405 635 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 GCLCP48506 637 aaPredicted RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 PDIA5Q14554 519 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 LONRF3Q496Y0 759 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 CEP55Q53EZ4 464 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 XRRA1Q6P2D8 792 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 VSIG10LQ86VR7 867 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 ELOA2Q8IYF1 753 aaPredicted RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 FAM133AQ8N9E0 248 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 SLC5A5Q92911 643 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 AK8Q96MA6 479 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 PARK7Q99497 189 aaKnown RBP10.57□□□□□ -0.72
DHFR-206ENST00000513048 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 FUCA2Q9BTY2 467 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 PORCNQ9H237 461 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 MROH8Q9H579 483 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 FAM13BQ9NYF5 915 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 VAV3Q9UKW4 847 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 PFASO15067 1338 aa10.57□□□□□ -0.72
DHFR-206ENST00000513048 SYCE3A1L190 88 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 KINO60870 393 aaKnown RBP10.56□□□□□ -0.72
DHFR-206ENST00000513048 ARP10275 920 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 EDNRBP24530 442 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
DHFR-206ENST00000513048 CNTN2Q02246 1040 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 CAMK4Q16566 473 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 B3GNT9Q6UX72 402 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 KRBA2Q6ZNG9 492 aa10.56□□□□□ -0.72
DHFR-206ENST00000513048 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms