RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 RPA1P27694 616 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 COPB2P35606 906 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 ZNF75DP51815 510 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 HMGCS2P54868 508 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 PSMD2Q13200 908 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.185e-61■□□□□ 11.3
RACK1-229ENST00000513027 VGLL4Q14135 290 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 NCAPHQ15003 741 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 PRR16Q569H4 304 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 CCDC84Q86UT8 332 aaPredicted RBP13.92□□□□□ -0.18
RACK1-229ENST00000513027 CLEC4DQ8WXI8 215 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 LARP4BQ92615 738 aaKnown RBP13.92□□□□□ -0.18
RACK1-229ENST00000513027 LENG9Q96B70 501 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 AGBL1Q96MI9 1066 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 RIT2Q99578 217 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 TEX13BQ9BXU2 312 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 TAF1DQ9H5J8 278 aaPredicted RBP13.92□□□□□ -0.18
RACK1-229ENST00000513027 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 WDR90Q96KV7 1748 aa13.92□□□□□ -0.18
RACK1-229ENST00000513027 PAPPA2Q9BXP8 1791 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 IGLV3-22A0A075B6J6 115 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 SPDYE5A6NIY4 337 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 PP2D1A8MPX8 630 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 MEIS1O00470 390 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 STAM2O75886 525 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 ALAS1P13196 640 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 BMP6P22004 513 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 CDC25AP30304 524 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 HOXA13P31271 388 aaPredicted RBP13.91□□□□□ -0.18
RACK1-229ENST00000513027 FKBP1BP68106 108 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 GRB10Q13322 594 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 PRAMEF18Q5VWM3 479 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 SPATA1Q5VX52 437 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 PCNX4Q63HM2 1172 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 FOXR2Q6PJQ5 311 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 LBX2Q6XYB7 198 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 NEK9Q8TD19 979 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 RAD54LQ92698 747 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 POLR3CQ9BUI4 534 aaPredicted RBP13.91□□□□□ -0.18
RACK1-229ENST00000513027 TRIM9Q9C026 710 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 IMPACTQ9P2X3 320 aa13.91□□□□□ -0.18
RACK1-229ENST00000513027 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
RACK1-229ENST00000513027 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
RACK1-229ENST00000513027 PARP14Q460N5 1801 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 FAM86B1E9PN63 330 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 MSH4O15457 936 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 FAM86B2P0C5J1 330 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 CCT6AP40227 531 aaKnown RBP13.9□□□□□ -0.18
RACK1-229ENST00000513027 SPAG1Q07617 926 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 PPIL2Q13356 520 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 PPP2R5CQ13362 524 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 CUL4BQ13620 913 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
RACK1-229ENST00000513027 GRAMD1CQ8IYS0 662 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 CHST13Q8NET6 341 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 NOC3LQ8WTT2 800 aaKnown RBP13.9□□□□□ -0.18
RACK1-229ENST00000513027 SLC5A5Q92911 643 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 DHTKD1Q96HY7 919 aaPredicted RBP13.9□□□□□ -0.18
RACK1-229ENST00000513027 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 MTRQ99707 1265 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
RACK1-229ENST00000513027 TUFT1Q9NNX1 390 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 RWDD2AQ9UIY3 292 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 KCNH4Q9UQ05 1017 aa13.9□□□□□ -0.18
RACK1-229ENST00000513027 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 POTEMA6NI47 508 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 PSMA7O14818 248 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 KIF20AO95235 890 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 SPIRE1Q08AE8 756 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 RNF207Q6ZRF8 634 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 UNC13DQ70J99 1090 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 FAM43AQ8N2R8 423 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 SYTL5Q8TDW5 730 aaPredicted RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 ATG4CQ96DT6 458 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 PNMA5Q96PV4 448 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 P2RX7Q99572 595 aaKnown RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 EXOC1Q9NV70 894 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
RACK1-229ENST00000513027 DNM3Q9UQ16 869 aa13.89□□□□□ -0.19
RACK1-229ENST00000513027 ESPNB1AK53 854 aa13.88□□□□□ -0.19
RACK1-229ENST00000513027 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
RACK1-229ENST00000513027 ADM5C9JUS6 153 aa13.88□□□□□ -0.19
RACK1-229ENST00000513027 PSMD10O75832 226 aa13.88□□□□□ -0.19
RACK1-229ENST00000513027 MSNP26038 577 aaKnown RBP13.88□□□□□ -0.19
RACK1-229ENST00000513027 STAT3P40763 770 aa13.88□□□□□ -0.19
RACK1-229ENST00000513027 GSDMDP57764 484 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms