RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 PHKBQ93100 1093 aa18.29■□□□□ 0.52
DDX41-214ENST00000512334 STXBP3O00186 592 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 SCG2P13521 617 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 CPT1AP50416 773 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 SNX17Q15036 470 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 PFKFB3Q16875 520 aaPredicted RBP18.28■□□□□ 0.52
DDX41-214ENST00000512334 BRDTQ58F21 947 aaPredicted RBP18.28■□□□□ 0.52
DDX41-214ENST00000512334 TYW1BQ6NUM6 668 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 PPP1R18Q6NYC8 613 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 CXCL17Q6UXB2 119 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 ZNF274Q96GC6 653 aaPredicted RBP18.28■□□□□ 0.52
DDX41-214ENST00000512334 SLC26A6Q9BXS9 759 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 BARHL2Q9NY43 387 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
DDX41-214ENST00000512334 PRKAG2Q9UGJ0 569 aa18.28■□□□□ 0.52
DDX41-214ENST00000512334 ELP1O95163 1332 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 CPLX1O14810 134 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 PQBP1O60828 265 aaKnown RBP18.27■□□□□ 0.52
DDX41-214ENST00000512334 MYL3P08590 195 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 ADCY7P51828 1080 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 C1orf53Q5VUE5 145 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 CCDC62Q6P9F0 684 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 PRDM5Q9NQX1 630 aaPredicted RBP18.27■□□□□ 0.52
DDX41-214ENST00000512334 RTEL1Q9NZ71 1219 aa18.27■□□□□ 0.52
DDX41-214ENST00000512334 FRMPD4Q14CM0 1322 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 DNAH12Q6ZR08 3092 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 A0A0U1RQG5 324 aaPredicted RBP18.26■□□□□ 0.51
DDX41-214ENST00000512334 SMCO2A6NFE2 343 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 PRPF3O43395 683 aaKnown RBP18.26■□□□□ 0.51
DDX41-214ENST00000512334 CABYRO75952 493 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 GH1P01241 217 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 IFNAR1P17181 557 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 TLE2Q04725 743 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 ANKRD1Q15327 319 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 NTRK3Q16288 839 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 RIC8AQ9NPQ8 531 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 DDX41Q9UJV9 622 aaKnown RBP18.26■□□□□ 0.51
DDX41-214ENST00000512334 PCDHA6Q9UN73 950 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 PCDHA8Q9Y5H6 950 aa18.26■□□□□ 0.51
DDX41-214ENST00000512334 RGS20O76081 388 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 AK2P54819 239 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 MRPS9P82933 396 aaKnown RBP18.25■□□□□ 0.51
DDX41-214ENST00000512334 GNPTABQ3T906 1256 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 PCNX4Q63HM2 1172 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 CPLX2Q6PUV4 134 aaKnown RBP18.25■□□□□ 0.51
DDX41-214ENST00000512334 TRIM22Q8IYM9 498 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 RNF26Q9BY78 433 aaPredicted RBP18.25■□□□□ 0.51
DDX41-214ENST00000512334 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
DDX41-214ENST00000512334 EHMT1Q9H9B1 1298 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 POLR3EQ9NVU0 708 aa18.25■□□□□ 0.51
DDX41-214ENST00000512334 ARVCFO00192 962 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 SORBS3O60504 671 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 STAM2O75886 525 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 NEK4P51957 841 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
DDX41-214ENST00000512334 PKN1Q16512 942 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
DDX41-214ENST00000512334 CCDC12Q8WUD4 166 aaPredicted RBP18.24■□□□□ 0.51
DDX41-214ENST00000512334 AFG1LQ8WV93 481 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 IL17RAQ96F46 866 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 GLT8D2Q9H1C3 349 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 ALDH8A1Q9H2A2 487 aaPredicted RBP18.24■□□□□ 0.51
DDX41-214ENST00000512334 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
DDX41-214ENST00000512334 COLQQ9Y215 455 aaPredicted RBP18.24■□□□□ 0.51
DDX41-214ENST00000512334 MROH7Q68CQ1 1323 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 CEP290O15078 2479 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 DCDC2CA8MYV0 355 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 CLTBP09497 229 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 PSMC6P62333 389 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 PURAQ00577 322 aaKnown RBP18.23■□□□□ 0.51
DDX41-214ENST00000512334 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 ITGA7Q13683 1181 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 XRRA1Q6P2D8 792 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 PGBD1Q96JS3 809 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 MTG1Q9BT17 334 aaPredicted RBP18.23■□□□□ 0.51
DDX41-214ENST00000512334 PDLIM7Q9NR12 457 aa18.23■□□□□ 0.51
DDX41-214ENST00000512334 A6NJR5 290 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 KPNA6O60684 536 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 GGPS1O95749 300 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 FOSP01100 380 aaPredicted RBP18.22■□□□□ 0.51
DDX41-214ENST00000512334 MMP3P08254 477 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 TGFB3P10600 412 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 UBA1P22314 1058 aaKnown RBP18.22■□□□□ 0.51
DDX41-214ENST00000512334 MAGEA10P43363 369 aaPredicted RBP18.22■□□□□ 0.51
DDX41-214ENST00000512334 SCRN1Q12765 414 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 LAMC2Q13753 1193 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 ANKRD33Q7Z3H0 272 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 NLRX1Q86UT6 975 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 INPP4AQ96PE3 977 aaPredicted RBP18.22■□□□□ 0.51
DDX41-214ENST00000512334 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
DDX41-214ENST00000512334 ANO3Q9BYT9 981 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 C6orf50Q9HD87 102 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 TMEM260Q9NX78 707 aa18.22■□□□□ 0.51
DDX41-214ENST00000512334 MYH7BA7E2Y1 1941 aa18.21■□□□□ 0.51
DDX41-214ENST00000512334 TLR3O15455 904 aaKnown RBP18.21■□□□□ 0.51
DDX41-214ENST00000512334 FIBPO43427 364 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms