RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK1-208	ENST00000512193	FBXO2	Q9UK22	296 aa	Predicted RBP	8.82	□□□□□ -1
NEK1-208	ENST00000512193	CDHR2	Q9BYE9	1310 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	STAMBP	O95630	424 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	SERPINB2	P05120	415 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	IFNAR2	P48551	515 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	LRCH2	Q5VUJ6	765 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	CAPN12	Q6ZSI9	719 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	CROCCP2	Q86T23	111 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	FAM186B	Q8IYM0	893 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	MAGOHB	Q96A72	148 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	TXNDC16	Q9P2K2	825 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	AP5Z1	O43299	807 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	GFPT2	O94808	682 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	TBC1D8	O95759	1140 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	FOS	P01100	380 aa	Predicted RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	AFP	P02771	609 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	PLA2G4B	P0C869	781 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	TXNRD1	Q16881	649 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	ENGASE	Q8NFI3	743 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	IFT88	Q13099	833 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	GSPT2	Q8IYD1	628 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	TRIM7	Q9C029	511 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	DBNDD1	Q9H9R9	158 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	PICK1	Q9NRD5	415 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	AK9	Q5TCS8	1911 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	IQGAP1	P46940	1657 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	TADA3	O75528	432 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	PRPF6	O94906	941 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	GCFC2	P16383	781 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	STX2	P32856	288 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	GKAP1	Q5VSY0	366 aa	Predicted RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	HHAT	Q5VTY9	493 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	PPP1R21	Q6ZMI0	780 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	PSMD1	Q99460	953 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	VPS37B	Q9H9H4	285 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	STIM2	Q9P246	746 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	FEZ2	Q9UHY8	353 aa	Predicted RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	ATP8A1	Q9Y2Q0	1164 aa		8.81	□□□□□ -1
NEK1-208	ENST00000512193	MRPL11	Q9Y3B7	192 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	BZW2	Q9Y6E2	419 aa	Known RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	MORC2	Q9Y6X9	1032 aa	Predicted RBP	8.81	□□□□□ -1
NEK1-208	ENST00000512193	CPD	O75976	1380 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	CLRN2	A0PK11	232 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	SFI1	A8K8P3	1242 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	DKC1	O60832	514 aa	Known RBP eCLIP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	ZBED4	O75132	1171 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	ADCY8	P40145	1251 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PLTP	P55058	493 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	SNAP25	P60880	206 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	GRIN1	Q05586	938 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	SMIM5	Q71RC9	77 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	RSRC1	Q96IZ7	334 aa	Known RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	PLCB1	Q9NQ66	1216 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	NFU1	Q9UMS0	254 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	USP17L5	A8MUK1	530 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	UBE2Q2L	H0YL09	131 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	KRT19	P08727	400 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PPP2R5E	Q16537	467 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	ALKBH5	Q6P6C2	394 aa	Known RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	KRT26	Q7Z3Y9	468 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	STAG2	Q8N3U4	1231 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	SRBD1	Q8N5C6	995 aa	Known RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	TAB3	Q8N5C8	712 aa	Predicted RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	IWS1	Q96ST2	819 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	CHP1	Q99653	195 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	BHMT2	Q9H2M3	363 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PCIF1	Q9H4Z3	704 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	MLXIP	Q9HAP2	919 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	HOMER3	Q9NSC5	361 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PTPN22	Q9Y2R2	807 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	COMMD10	Q9Y6G5	202 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	ADGRB1	O14514	1584 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	CEMIP	Q8WUJ3	1361 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PGRMC1	O00264	195 aa	Known RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	FER	P16591	822 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	FAM84B	Q96KN1	310 aa	Predicted RBP	8.8	□□□□□ -1
NEK1-208	ENST00000512193	AP1M1	Q9BXS5	423 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	KANSL2	Q9H9L4	492 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PARP2	Q9UGN5	583 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	TUBE1	Q9UJT0	475 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	DAAM1	Q9Y4D1	1078 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	PTPRU	Q92729	1446 aa		8.8	□□□□□ -1
NEK1-208	ENST00000512193	ZNF131	P52739	623 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	CACNB3	P54284	484 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	IRX3	P78415	501 aa	Predicted RBP	8.79	□□□□□ -1
NEK1-208	ENST00000512193	LRRC63	Q05C16	580 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	NNT	Q13423	1086 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	MCTP2	Q6DN12	878 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	CLEC4G	Q6UXB4	293 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	CSRNP1	Q96S65	589 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	TACO1	Q9BSH4	297 aa	Known RBP	8.79	□□□□□ -1
NEK1-208	ENST00000512193	TEKT3	Q9BXF9	490 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	TMEM260	Q9NX78	707 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	GCNT4	Q9P109	453 aa		8.79	□□□□□ -1
NEK1-208	ENST00000512193	STK38L	Q9Y2H1	464 aa		8.79	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms