RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 HEATR3Q7Z4Q2 680 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 FAM160B2Q86V87 743 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 PGBD1Q96JS3 809 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 PIGSQ96S52 555 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 UBA5Q9GZZ9 404 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 DDX19AQ9NUU7 478 aaKnown RBP11.88□□□□□ -0.51
HOXA4-203ENST00000511914 MYH6P13533 1939 aa11.88□□□□□ -0.51
HOXA4-203ENST00000511914 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
HOXA4-203ENST00000511914 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
HOXA4-203ENST00000511914 CMA1P23946 247 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 RGS2P41220 211 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 TOB1P50616 345 aaPredicted RBP11.87□□□□□ -0.51
HOXA4-203ENST00000511914 NAPAP54920 295 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 LRIT3Q3SXY7 679 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 KRT25Q7Z3Z0 450 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 PLEKHH3Q7Z736 793 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 APBA2Q99767 749 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 LTBP2Q14767 1821 aa11.87□□□□□ -0.51
HOXA4-203ENST00000511914 MYH4Q9Y623 1939 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 CCDC194A0A1B0GVG4 234 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 SMCO2A6NFE2 343 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 CUTAO60888 179 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 COL6A1P12109 1028 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 CNGA1P29973 690 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 STAT2P52630 851 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 MRPL12P52815 198 aaKnown RBP11.86□□□□□ -0.51
HOXA4-203ENST00000511914 USP14P54578 494 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 CEBPZQ03701 1054 aaKnown RBP11.86□□□□□ -0.51
HOXA4-203ENST00000511914 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 MORN1Q5T089 497 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 SYDE2Q5VT97 1194 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 USP6NLQ92738 828 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
HOXA4-203ENST00000511914 FEZ1Q99689 392 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
HOXA4-203ENST00000511914 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 RIC8AQ9NPQ8 531 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 MTMR10Q9NXD2 777 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 FLRT1Q9NZU1 646 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 FEM1BQ9UK73 627 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 EYSQ5T1H1 3165 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 MYH15Q9Y2K3 1946 aa11.86□□□□□ -0.51
HOXA4-203ENST00000511914 LAMA2P24043 3122 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 TMEM232C9JQI7 657 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 CTAGE5O15320 804 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 CNMDO75829 334 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 FDX1P10109 184 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 PTPREP23469 700 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 ADCY7P51828 1080 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 FAM160A1Q05DH4 1040 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 AXDND1Q5T1B0 1012 aaPredicted RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 ARL6IP4Q66PJ3 421 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 RASGRP2Q7LDG7 609 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 ACER1Q8TDN7 264 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 PIBF1Q8WXW3 757 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 AMNQ9BXJ7 453 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 FTOQ9C0B1 505 aaKnown RBP eCLIP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 SENP6Q9GZR1 1112 aaPredicted RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 STXBP5LQ9Y2K9 1186 aa11.85□□□□□ -0.51
HOXA4-203ENST00000511914 SRPRBQ9Y5M8 271 aaKnown RBP11.85□□□□□ -0.51
HOXA4-203ENST00000511914 RLFQ13129 1914 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 LAD1O00515 517 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
HOXA4-203ENST00000511914 SLC16A2P36021 539 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 MAP2K5Q13163 448 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 FBXO11Q86XK2 927 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
HOXA4-203ENST00000511914 REXO1Q8N1G1 1221 aaKnown RBP11.84□□□□□ -0.51
HOXA4-203ENST00000511914 GTF3C2Q8WUA4 911 aaPredicted RBP11.84□□□□□ -0.51
HOXA4-203ENST00000511914 CUL5Q93034 780 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 CPVLQ9H3G5 476 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 PCDHA6Q9UN73 950 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 PCDHA8Q9Y5H6 950 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 A0A0C4DFX4 3053 aa11.84□□□□□ -0.51
HOXA4-203ENST00000511914 FSD2A1L4K1 749 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L15C9J2P7 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L13C9JLJ4 530 aa11.83□□□□□ -0.52
HOXA4-203ENST00000511914 USP17L11C9JVI0 530 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms