RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IGLV3-22A0A075B6J6 115 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 FAM86B1E9PN63 330 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 FAM86B2P0C5J1 330 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 STAT3P40763 770 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-209ENST00000511426 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
SCLT1-209ENST00000511426 PCNX4Q63HM2 1172 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 RNF207Q6ZRF8 634 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 ERMNQ8TAM6 284 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 SYTL5Q8TDW5 730 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-209ENST00000511426 CDK5RAP3Q96JB5 506 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 DNAJC25Q9H1X3 360 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 KBTBD4Q9NVX7 518 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
SCLT1-209ENST00000511426 RPS6P62753 249 aaKnown RBP17.11■□□□□ 0.33
SCLT1-209ENST00000511426 DPYDQ12882 1025 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
SCLT1-209ENST00000511426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCLT1-209ENST00000511426 SLC10A4Q96EP9 437 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 CLMNQ96JQ2 1002 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 PANK2Q9BZ23 570 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
SCLT1-209ENST00000511426 MEIS1O00470 390 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 MUTP22033 750 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 OSBPP22059 807 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 C2orf69Q8N8R5 385 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 SNX29Q8TEQ0 813 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 TBC1D5Q92609 795 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
SCLT1-209ENST00000511426 WDR11Q9BZH6 1224 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-209ENST00000511426 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 BECN2A8MW95 431 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 GOLGA6L19H0YKK7 550 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 IKBKBO14920 756 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 STAM2O75886 525 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-209ENST00000511426 PLCG1P19174 1290 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 TREML2Q5T2D2 321 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 RIOX2Q8IUF8 465 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 RIT2Q99578 217 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 MXRA8Q9BRK3 442 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 PFASO15067 1338 aa17.1■□□□□ 0.33
SCLT1-209ENST00000511426 PP2D1A8MPX8 630 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 SLC25A27O95847 323 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 TPM4P67936 248 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 MORC3Q14149 939 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 KCNB1Q14721 858 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 IQCB1Q15051 598 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 CNNM4Q6P4Q7 775 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 PLA2G4DQ86XP0 818 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 CCDC47Q96A33 483 aaKnown RBP17.09■□□□□ 0.33
SCLT1-209ENST00000511426 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 MAN1B1Q9UKM7 699 aa17.09■□□□□ 0.33
SCLT1-209ENST00000511426 POTEMA6NI47 508 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 MSH4O15457 936 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 MAFGO15525 162 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 POTEJP0CG39 1038 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 ZBTB48P10074 688 aaPredicted RBP17.08■□□□□ 0.32
SCLT1-209ENST00000511426 CDC25AP30304 524 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 MOB2Q70IA6 237 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 WNK4Q96J92 1243 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
SCLT1-209ENST00000511426 UBIAD1Q9Y5Z9 338 aa17.08■□□□□ 0.32
SCLT1-209ENST00000511426 PRR29P0C7W0 189 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 CETPP11597 493 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 PPP1R2P41236 205 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 AFMP43652 599 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 GTF2A2P52657 109 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 HERVK_113P62684 666 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 GRB10Q13322 594 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 MOGSQ13724 837 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-209ENST00000511426 DNERQ8NFT8 737 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 NSUN6Q8TEA1 469 aaKnown RBP17.07■□□□□ 0.32
SCLT1-209ENST00000511426 LARP4BQ92615 738 aaKnown RBP17.07■□□□□ 0.32
SCLT1-209ENST00000511426 ERCC4Q92889 916 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-209ENST00000511426 PDLIM2Q96JY6 352 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 PDCD2LQ9BRP1 358 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 HOMER2Q9NSB8 354 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 COL20A1Q9P218 1284 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms