RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 LDHAP00338 332 aaKnown RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 PRRT2Q7Z6L0 340 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 OSBP2Q969R2 916 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 ZNF302Q9NR11 478 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 RNF186Q9NXI6 227 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 KANSL3Q9P2N6 904 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 MYO6Q9UM54 1294 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 TACC3Q9Y6A5 838 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 CCDC169A6NNP5 214 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 PSMA7O14818 248 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 CCNT1O60563 726 aaKnown RBP10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 TM4SF4P48230 202 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 VEGFBP49765 207 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 SEMA3FQ13275 785 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 CAGE1Q8TC20 777 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 KIAA1586Q9HCI6 787 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 PGAP2Q9UHJ9 254 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.77□□□□□ -0.68
POLR2J3-215ENST00000511313 GSG1L2A8MUP6 293 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 NCK2O43639 380 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 USP2O75604 605 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 HSPA4P34932 840 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 PSPC1Q8WXF1 523 aaKnown RBP10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 DYNLL2Q96FJ2 89 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 RGPD3A6NKT7 1758 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 RGPD4Q7Z3J3 1758 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 ABCA3Q99758 1704 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 NIPA1Q7RTP0 329 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 THEM5Q8N1Q8 247 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 MKL1Q969V6 931 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 PPFIA1Q13136 1202 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 OLFML2BQ68BL8 750 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 CATSPER4Q7RTX7 472 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 NME8Q8N427 588 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 TBC1D5Q92609 795 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 SGIP1Q9BQI5 828 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
POLR2J3-215ENST00000511313 MYL1P05976 194 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 OR52Z1P0C646 297 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 XRCC5P13010 732 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 TPRNQ4KMQ1 711 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 SLC38A7Q9NVC3 462 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 NFKBIAP25963 317 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 MXD4Q14582 209 aaPredicted RBP10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 PRR16Q569H4 304 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 PRAMEF18Q5VWM3 479 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 NLRP7Q8WX94 980 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 KIFAP3Q92845 792 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 ATG4CQ96DT6 458 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 TINF2Q9BSI4 451 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 PUS7LQ9H0K6 701 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 DDX19AQ9NUU7 478 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 CCDC40Q4G0X9 1142 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 RIT2Q99578 217 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 PCDHB12Q9Y5F1 795 aa10.76□□□□□ -0.69
POLR2J3-215ENST00000511313 CCP110O43303 1012 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 NR3C2P08235 984 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 EIF2AK2P19525 551 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 GOLGA8FQ08AF8 430 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 GOLGA8DPQ0D2H9 430 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 MOXD1Q6UVY6 613 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 SNX29Q8TEQ0 813 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 C1orf112Q9NSG2 853 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 TBC1D7Q9P0N9 293 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 GINS2Q9Y248 185 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 APOBRQ0VD83 1088 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 PTPAQ15257 358 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 XKR3Q5GH77 459 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 LDLRAD1Q5T700 205 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 C20orf194Q5TEA3 1177 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 ARMCX5Q6P1M9 558 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 TRIM62Q9BVG3 475 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 TMEM206Q9H813 350 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 ATP6V0A4Q9HBG4 840 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 CGNQ9P2M7 1197 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 PCDHA10Q9Y5I2 948 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 PEAK1Q9H792 1746 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 BTBD19C9JJ37 291 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 PFKFB2O60825 505 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 RASA1P20936 1047 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 LBX1P52954 281 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 NBR1Q14596 966 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 TMTC3Q6ZXV5 915 aa10.75□□□□□ -0.69
POLR2J3-215ENST00000511313 COL18A1P39060 1754 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms