RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PCDHA2Q9Y5H9 948 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 TIMM13Q9Y5L4 95 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 TNKSO95271 1327 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 PITPNM2Q9BZ72 1349 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 PTPDC1A2A3K4 754 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 C7orf72A4D263 438 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 SRGAP2CP0DJJ0 459 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 SESN3P58005 492 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 INSM1Q01101 510 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 ZBTB46Q86UZ6 589 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 CCAR1Q8IX12 1150 aaKnown RBP7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 CCDC146Q8IYE0 955 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 CHTF18Q8WVB6 975 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 TP53INP1Q96A56 240 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 HOOK2Q96ED9 719 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 FCRL2Q96LA5 508 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 RTFDC1Q9BY42 306 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 SPTLC3Q9NUV7 552 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 ERVK13-1Q9NX77 482 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 GABBR1Q9UBS5 961 aa7.28□□□□□ -1.24
HMGB1P47-201ENST00000511281 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 WASH4PA8MWX3 477 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 C1QTNF9BB2RNN3 333 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 H3BS24 57 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 GSC2O15499 205 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 MAP4K4O95819 1239 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 GNALP38405 381 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 LRRC41Q15345 812 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 CDKAL1Q5VV42 579 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 IQSEC1Q6DN90 963 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 C11orf74Q86VG3 221 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 CHPFQ8IZ52 775 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 FBXL6Q8N531 539 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 TMEM52Q8NDY8 209 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 UBE2FQ969M7 185 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 SMAD5Q99717 465 aaKnown RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 CDADC1Q9BWV3 514 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 THG1LQ9NWX6 298 aaKnown RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 ZSWIM5Q9P217 1185 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 PPARGC1AQ9UBK2 798 aaKnown RBP7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 FBXL7Q9UJT9 491 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 CBLCQ9ULV8 474 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 PCDHA11Q9Y5I1 949 aa7.27□□□□□ -1.25
HMGB1P47-201ENST00000511281 SSU72P8A0A1W2PR75 194 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 FZD9O00144 591 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 ESR1P03372 595 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 KPNA1P52294 538 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 PHC1P78364 1004 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 ST5P78524 1137 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 GPR158Q5T848 1215 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 FAM102BQ5T8I3 360 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 SLC51AQ86UW1 340 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 NLRP10Q86W26 655 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 CPNE8Q86YQ8 564 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 MYO1HQ8N1T3 1032 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 FAM181AQ8N9Y4 354 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 NLGN2Q8NFZ4 835 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 DPF3Q92784 378 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 DCAF5Q96JK2 942 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 GPR101Q96P66 508 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 BOCQ9BWV1 1114 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 OXSMQ9NWU1 459 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 X6R8D5 127 aa7.26□□□□□ -1.25
HMGB1P47-201ENST00000511281 TMEM265A0A087WTH1 108 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 RNF225M0QZC1 329 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 TGM5O43548 720 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 NPHS1O60500 1241 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 ZBTB48P10074 688 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 LTKP29376 864 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 GATA4P43694 442 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 DNM2P50570 870 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 KLF1Q13351 362 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 CRY1Q16526 586 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 TMEM240Q5SV17 173 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 HLA-DQA1Q5Y7H0 255 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 ARHGAP27Q6ZUM4 889 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 C2orf69Q8N8R5 385 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 CLRN3Q8NCR9 226 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 NETO1Q8TDF5 533 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 SLC5A5Q92911 643 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 OSBPL1AQ9BXW6 950 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 RHOBTB2Q9BYZ6 727 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 SMURF1Q9HCE7 757 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 AASDHPPTQ9NRN7 309 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 SPO11Q9Y5K1 396 aa7.25□□□□□ -1.25
HMGB1P47-201ENST00000511281 IGLV1-40P01703 118 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 BCL6P41182 706 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 CORO7P57737 925 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 LAPTM5Q13571 262 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 GPR19Q15760 415 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 WDR75Q8IWA0 830 aaKnown RBP7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 NAT16Q8N8M0 369 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 SHKBP1Q8TBC3 707 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 ATG3Q9NT62 314 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
HMGB1P47-201ENST00000511281 PLEKHD1A6NEE1 506 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms