RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 WDR93Q6P2C0 686 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 NAP1L4Q99733 375 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 LACRTQ9GZZ8 138 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 POLRMTO00411 1230 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 MPHOSPH10O00566 681 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 ZBTB5O15062 677 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 USO1O60763 962 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 GCFC2P16383 781 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 MCM3P25205 808 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 CLK2P49760 499 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 ATP2B2Q01814 1243 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 SEPT2Q15019 361 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 SECISBP2LQ93073 1101 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 NUDT12Q9BQG2 462 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 MMRN2Q9H8L6 949 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 SIK3Q9Y2K2 1263 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 C10orf71Q711Q0 1435 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 SLC27A3Q5K4L6 730 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 PSTPIP2Q9H939 334 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 FAM207AQ9NSI2 230 aaPredicted RBP19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 BMP2KQ9NSY1 1161 aaPredicted RBP19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 ATP6V0A2Q9Y487 856 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 RCCD1A6NED2 376 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 PPP1R11O60927 126 aaPredicted RBP19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 SHMT1P34896 483 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 CYP27A1Q02318 531 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 TTBK2Q6IQ55 1244 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 FOXR2Q6PJQ5 311 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 C2CD5Q86YS7 1000 aa19.92■□□□□ 0.78
CCHCR1-228ENST00000509552 NKRFO15226 690 aaKnown RBP eCLIP19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 PROM2Q8N271 834 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 CERS5Q8N5B7 392 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 PURBQ96QR8 312 aaKnown RBP19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 MMS19Q96T76 1030 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 NT5C3AQ9H0P0 336 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 GLT8D2Q9H1C3 349 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 DEF6Q9H4E7 631 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 PDE11AQ9HCR9 933 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 PCDHA12Q9UN75 941 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 KDM3AQ9Y4C1 1321 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 MACROD2A1Z1Q3 448 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 SRGAP2O75044 1071 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 SLC16A2P36021 539 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 USP14P54578 494 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 EHHADHQ08426 723 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 KCNK18Q7Z418 384 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 MYOCDQ8IZQ8 938 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 CAGE1Q8TC20 777 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 ACBD3Q9H3P7 528 aa19.91■□□□□ 0.78
CCHCR1-228ENST00000509552 LRRC37AA6NMS7 1700 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 TRIM58Q8NG06 486 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 HAS1Q92839 578 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 CAPZA3Q96KX2 299 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 IFIH1Q9BYX4 1025 aaKnown RBP19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 JADE2Q9NQC1 790 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 USP17L10C9JJH3 530 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 G3V3G9 751 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 SCNN1DP51172 638 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 DCAF8Q5TAQ9 597 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 IQCEQ6IPM2 695 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 LRRC55Q6ZSA7 311 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 KCTD1Q719H9 257 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 TXLNBQ8N3L3 684 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 TEKT1Q969V4 418 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 CCDC17Q96LX7 622 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 DUSP10Q9Y6W6 482 aa19.9■□□□□ 0.78
CCHCR1-228ENST00000509552 H3BQF6 201 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 ONECUT3O60422 494 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 TACC1O75410 805 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 COASYQ13057 564 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 CASP8Q14790 479 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 LRRC41Q15345 812 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 MAP9Q49MG5 647 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 CDC42EP5Q6NZY7 148 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 HHIPL2Q6UWX4 724 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 TANGO6Q9C0B7 1094 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 PANK4Q9NVE7 773 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 ARHGAP20Q9P2F6 1191 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 PCDHA13Q9Y5I0 950 aa19.89■□□□□ 0.77
CCHCR1-228ENST00000509552 PLEKP08567 350 aaPredicted RBP19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 KIF11P52732 1056 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 FKBP3Q00688 224 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 ECM1Q16610 540 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 RRAGAQ7L523 313 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 NEK11Q8NG66 645 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 DNAJC19Q96DA6 116 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 MTMR8Q96EF0 704 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 EDEM3Q9BZQ6 932 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 SUGCTQ9HAC7 445 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 TARSL2A2RTX5 802 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 ZNF263O14978 683 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 AKR1B10O60218 316 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 SSBP05455 408 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 FAM26FQ5R3K3 315 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 CACNA2D4Q7Z3S7 1137 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 KRT26Q7Z3Y9 468 aa19.88■□□□□ 0.77
CCHCR1-228ENST00000509552 CALCOCO1Q9P1Z2 691 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms