RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MFSD5Q6N075 450 aa21.52■■□□□ 1.04
UBE3D-207ENST00000509102 ZBTB43O43298 467 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 ARIH2O95376 493 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 CD4P01730 458 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 ITGB8P26012 769 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 PPIGQ13427 754 aaKnown RBP eCLIP21.51■■□□□ 1.03
UBE3D-207ENST00000509102 SHHQ15465 462 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 FAM47CQ5HY64 1035 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 APOA5Q6Q788 366 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 RASEFQ8IZ41 740 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 SRBD1Q8N5C6 995 aaKnown RBP21.51■■□□□ 1.03
UBE3D-207ENST00000509102 PPP1R12CQ9BZL4 782 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 PPP4R2Q9NY27 417 aa21.51■■□□□ 1.03
UBE3D-207ENST00000509102 LAMA3Q16787 3333 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 STAM2O75886 525 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 CASTP20810 708 aaKnown RBP21.5■■□□□ 1.03
UBE3D-207ENST00000509102 EXOSC10Q01780 885 aaKnown RBP21.5■■□□□ 1.03
UBE3D-207ENST00000509102 LAMC2Q13753 1193 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 GNPTABQ3T906 1256 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 TMTC3Q6ZXV5 915 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 RAB11FIP4Q86YS3 637 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 DHX37Q8IY37 1157 aaKnown RBP21.5■■□□□ 1.03
UBE3D-207ENST00000509102 CCDC82Q8N4S0 544 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 AFG1LQ8WV93 481 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 RNPC3Q96LT9 517 aaKnown RBP21.5■■□□□ 1.03
UBE3D-207ENST00000509102 HIPK3Q9H422 1215 aa21.5■■□□□ 1.03
UBE3D-207ENST00000509102 DDX41Q9UJV9 622 aaKnown RBP21.5■■□□□ 1.03
UBE3D-207ENST00000509102 NAP1L2Q9ULW6 460 aaPredicted RBP21.5■■□□□ 1.03
UBE3D-207ENST00000509102 TGFB3P10600 412 aa21.49■■□□□ 1.03
UBE3D-207ENST00000509102 DGKDQ16760 1214 aa21.49■■□□□ 1.03
UBE3D-207ENST00000509102 RTN1Q16799 776 aa21.49■■□□□ 1.03
UBE3D-207ENST00000509102 ADCK5Q3MIX3 580 aa21.49■■□□□ 1.03
UBE3D-207ENST00000509102 NFRKBQ6P4R8 1299 aa21.49■■□□□ 1.03
UBE3D-207ENST00000509102 CMTR1Q8N1G2 835 aaKnown RBP21.49■■□□□ 1.03
UBE3D-207ENST00000509102 ALDH8A1Q9H2A2 487 aaPredicted RBP21.49■■□□□ 1.03
UBE3D-207ENST00000509102 GRIN2DO15399 1336 aa21.49■■□□□ 1.03
UBE3D-207ENST00000509102 PIK3CDO00329 1044 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 B4GALT4O60513 344 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 MMP3P08254 477 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 PSMA5P28066 241 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 HSPA4P34932 840 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 CHMP4BP1P59074 171 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 PTPN11Q06124 597 aaPredicted RBP21.48■■□□□ 1.03
UBE3D-207ENST00000509102 C1QBPQ07021 282 aaKnown RBP21.48■■□□□ 1.03
UBE3D-207ENST00000509102 ARHGAP1Q07960 439 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 COL9A3Q14050 684 aaPredicted RBP21.48■■□□□ 1.03
UBE3D-207ENST00000509102 C9orf50Q5SZB4 431 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 BLOC1S2Q6QNY1 142 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 EMID1Q96A84 441 aaPredicted RBP21.48■■□□□ 1.03
UBE3D-207ENST00000509102 TCEANC2Q96MN5 208 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 JAKMIP1Q96N16 626 aaKnown RBP21.48■■□□□ 1.03
UBE3D-207ENST00000509102 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 PSTPIP2Q9H939 334 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 NOD1Q9Y239 953 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 KIAA1217Q5T5P2 1943 aa21.48■■□□□ 1.03
UBE3D-207ENST00000509102 KLF18A0A0U1RQI7 1052 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 CCDC196A0A1B0GTZ2 297 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 GOLGA8AA7E2F4 631 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 GOLGA8BA8MQT2 603 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 EPB41L2O43491 1005 aaKnown RBP21.47■■□□□ 1.03
UBE3D-207ENST00000509102 RCAN1P53805 252 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 NBPF20Q3BBV1 942 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 XRRA1Q6P2D8 792 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 HEATR3Q7Z4Q2 680 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 KATNAL1Q9BW62 490 aa21.47■■□□□ 1.03
UBE3D-207ENST00000509102 PSRC1Q6PGN9 363 aaPredicted RBP21.46■■□□□ 1.03
UBE3D-207ENST00000509102 DEFB123Q8N688 67 aa21.46■■□□□ 1.03
UBE3D-207ENST00000509102 IL31RAQ8NI17 732 aa21.46■■□□□ 1.03
UBE3D-207ENST00000509102 PPTC7Q8NI37 304 aa21.46■■□□□ 1.03
UBE3D-207ENST00000509102 MLXIPQ9HAP2 919 aa21.46■■□□□ 1.03
UBE3D-207ENST00000509102 SPDYE3A6NKU9 549 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 CSF2RAP15509 400 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 CYP2C18P33260 490 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 USP17L6PQ6QN14 398 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 KCNB2Q92953 911 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 SPATA33Q96N06 139 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 MTIF3Q9H2K0 278 aaKnown RBP21.45■■□□□ 1.02
UBE3D-207ENST00000509102 EHMT1Q9H9B1 1298 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 TRMT13Q9NUP7 481 aaKnown RBP21.45■■□□□ 1.02
UBE3D-207ENST00000509102 BRPF3Q9ULD4 1205 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 SNX14Q9Y5W7 946 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 FRMPD4Q14CM0 1322 aa21.45■■□□□ 1.02
UBE3D-207ENST00000509102 SZT2Q5T011 3432 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 hCG_1642624A0A1W2PR95 340 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 hCG_1984214I3L0E3 225 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 GGPS1O95749 300 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 EPHB4P54760 987 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 SMAD3P84022 425 aaKnown RBP21.44■■□□□ 1.02
UBE3D-207ENST00000509102 CELF3Q5SZQ8 465 aaKnown RBP21.44■■□□□ 1.02
UBE3D-207ENST00000509102 Q6ZUG5 572 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 NLRX1Q86UT6 975 aa21.44■■□□□ 1.02
UBE3D-207ENST00000509102 ZNF713Q8N859 430 aaPredicted RBP21.44■■□□□ 1.02
UBE3D-207ENST00000509102 NOC4LQ9BVI4 516 aaKnown RBP21.44■■□□□ 1.02
UBE3D-207ENST00000509102 NOP56O00567 594 aaKnown RBP21.43■■□□□ 1.02
UBE3D-207ENST00000509102 MEIS2O14770 477 aa21.43■■□□□ 1.02
UBE3D-207ENST00000509102 FIBPO43427 364 aa21.43■■□□□ 1.02
UBE3D-207ENST00000509102 PPFIA4O75335 1185 aa21.43■■□□□ 1.02
UBE3D-207ENST00000509102 RGS20O76081 388 aa21.43■■□□□ 1.02
UBE3D-207ENST00000509102 UBA1P22314 1058 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms