RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-208ENST00000508869 GRB10Q13322 594 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 KCNA10Q16322 511 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 SV2CQ496J9 727 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 TNNI3KQ59H18 835 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 EEF1DP3Q658K8 133 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 MBLAC2Q68D91 279 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 RPTNQ6XPR3 784 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 ANKS3Q6ZW76 656 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 MRGPRX3Q96LB0 322 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 GMLQ99445 158 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 SIRT5Q9NXA8 310 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 CLEC1BQ9P126 229 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 RWDD3Q9Y3V2 267 aa6.07□□□□□ -1.44
TMCC1-208ENST00000508869 ZC3H13Q5T200 1668 aaKnown RBP6.07□□□□□ -1.44
TMCC1-208ENST00000508869 XIRP1Q702N8 1843 aaKnown RBP6.06□□□□□ -1.44
TMCC1-208ENST00000508869 CPS1P31327 1500 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 ITGAVP06756 1048 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 ARL4AP40617 200 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 CDR1P51861 262 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 NCKAP1LP55160 1127 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 SSPNQ14714 243 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 SF1Q15637 639 aaKnown RBP6.06□□□□□ -1.44
TMCC1-208ENST00000508869 BICRALQ6AI39 1079 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 GTF2IRD2BQ6EKJ0 949 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 TMC6Q7Z403 805 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 GTF2IRD2Q86UP8 949 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 TRIM59Q8IWR1 403 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 LRRC56Q8IYG6 542 aaPredicted RBP6.06□□□□□ -1.44
TMCC1-208ENST00000508869 PANK1Q8TE04 598 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 BTN2A2Q8WVV5 523 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 GULP1Q9UBP9 304 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 A2ML1A8K2U0 1454 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 DEPDC5O75140 1603 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 ZMYM3Q14202 1370 aa6.06□□□□□ -1.44
TMCC1-208ENST00000508869 GPATCH8Q9UKJ3 1502 aaKnown RBP6.05□□□□□ -1.44
TMCC1-208ENST00000508869 ARID1BQ8NFD5 2236 aaPredicted RBP6.05□□□□□ -1.44
TMCC1-208ENST00000508869 CCDC18Q5T9S5 1454 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 NPHP3-ACAD11A0A0J9YXS1 232 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
TMCC1-208ENST00000508869 ARNTLO00327 626 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 NOP56O00567 594 aaKnown RBP6.05□□□□□ -1.44
TMCC1-208ENST00000508869 SEMA7AO75326 666 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 THBDP07204 575 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 DBHP09172 617 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 PLS3P13797 630 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 PAMP19021 973 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 LINC00310P59036 64 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 FXNQ16595 210 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 NAALADL2Q58DX5 795 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 LCNL1Q6ZST4 164 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 COPS5Q92905 334 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 PDLIM7Q9NR12 457 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 CLIP1P30622 1438 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 CASKIN1Q8WXD9 1431 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 SYNMO15061 1565 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 ADAMTS20P59510 1910 aa6.05□□□□□ -1.44
TMCC1-208ENST00000508869 FAM135AQ9P2D6 1515 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 MED14O60244 1454 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 RNF17Q9BXT8 1623 aaKnown RBP6.04□□□□□ -1.44
TMCC1-208ENST00000508869 C7orf72A4D263 438 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 KLF4O43474 513 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 ZNF143P52747 638 aaPredicted RBP6.04□□□□□ -1.44
TMCC1-208ENST00000508869 INF2Q27J81 1249 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 PRSS53Q2L4Q9 553 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 PLEKHN1Q494U1 663 aaPredicted RBP6.04□□□□□ -1.44
TMCC1-208ENST00000508869 ZNF227Q86WZ6 799 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 FAM9AQ8IZU1 332 aaPredicted RBP6.04□□□□□ -1.44
TMCC1-208ENST00000508869 FRS2Q8WU20 508 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 TOX2Q96NM4 488 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 IRF2BPLQ9H1B7 796 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 NKX2-4Q9H2Z4 354 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 BCAS3Q9H6U6 928 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 EPB41L4AQ9HCS5 686 aaPredicted RBP6.04□□□□□ -1.44
TMCC1-208ENST00000508869 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 TMEFF2Q9UIK5 374 aaPredicted RBP6.04□□□□□ -1.44
TMCC1-208ENST00000508869 KIAA1107Q9UPP5 1409 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 IQGAP1P46940 1657 aa6.04□□□□□ -1.44
TMCC1-208ENST00000508869 A2MP01023 1474 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 SHANK2Q9UPX8 1470 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 TIAM1Q13009 1591 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 A0A1W2PQJ5 194 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 F8W031 263 aaPredicted RBP6.03□□□□□ -1.44
TMCC1-208ENST00000508869 NAT2P11245 290 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 GRIA2P42262 883 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 ZNF200P98182 395 aaPredicted RBP6.03□□□□□ -1.44
TMCC1-208ENST00000508869 CBX2Q14781 532 aaPredicted RBP6.03□□□□□ -1.44
TMCC1-208ENST00000508869 POMZP3Q6PJE2 187 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 SPOCD1Q6ZMY3 1216 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 LDHDQ86WU2 507 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 TMEFF1Q8IYR6 380 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 NLGN2Q8NFZ4 835 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 MTA3Q9BTC8 594 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 CYP26B1Q9NR63 512 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 CNOT6Q9ULM6 557 aaKnown RBP6.03□□□□□ -1.44
TMCC1-208ENST00000508869 KCTD3Q9Y597 815 aa6.03□□□□□ -1.44
TMCC1-208ENST00000508869 PZPP20742 1482 aa6.02□□□□□ -1.44
TMCC1-208ENST00000508869 FYCO1Q9BQS8 1478 aa6.02□□□□□ -1.44
TMCC1-208ENST00000508869 MBD5Q9P267 1494 aa6.02□□□□□ -1.44
TMCC1-208ENST00000508869 BTBD11A6QL63 1104 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms