RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 KLHDC9Q8NEP7 349 aa16.85■□□□□ 0.29
SH3TC1-216ENST00000508641 COPS5Q92905 334 aa16.85■□□□□ 0.29
SH3TC1-216ENST00000508641 UPF3AQ9H1J1 476 aaKnown RBP16.85■□□□□ 0.29
SH3TC1-216ENST00000508641 CEP290O15078 2479 aa16.85■□□□□ 0.29
SH3TC1-216ENST00000508641 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 CTAGE5O15320 804 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 ARIH2O95376 493 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 ACLYP53396 1101 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 TTLL4Q14679 1199 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 LY6KQ17RY6 165 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 RTEL1Q9NZ71 1219 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 PCDHA6Q9UN73 950 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 PHF24Q9UPV7 400 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 PCDHA8Q9Y5H6 950 aa16.84■□□□□ 0.29
SH3TC1-216ENST00000508641 EVI5O60447 810 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 CDKL5O76039 1030 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 RGS20O76081 388 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 MRPS9P82933 396 aaKnown RBP16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 LRRC26Q2I0M4 334 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 CCDC62Q6P9F0 684 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 PCSK9Q8NBP7 692 aaKnown RBP16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 OR6J1Q8NGC5 347 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 CCDC12Q8WUD4 166 aaPredicted RBP16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 PGBD1Q96JS3 809 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 TSEN34Q9BSV6 310 aaKnown RBP16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 Q9Y3F1 56 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 MRVI1Q9Y6F6 885 aa16.83■□□□□ 0.28
SH3TC1-216ENST00000508641 A0A1W2PQ45 241 aaPredicted RBP16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 A0A1W2PQY0 241 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 DEXIO95424 95 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 ASGR1P07306 291 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 JAKMIP3Q5VZ66 844 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 CCSAPQ6IQ19 270 aaPredicted RBP16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 VTI1AQ96AJ9 217 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 GLT8D2Q9H1C3 349 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 LIMCH1Q9UPQ0 1083 aa16.82■□□□□ 0.28
SH3TC1-216ENST00000508641 MOXD2PA6NHM9 499 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 SORBS3O60504 671 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 CTDNEP1O95476 244 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 PCNX4Q63HM2 1172 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 SLC39A5Q6ZMH5 540 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 C7orf61Q8IZ16 206 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 GTF3C6Q969F1 213 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 AIFM3Q96NN9 605 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 ZMYND12Q9H0C1 365 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
SH3TC1-216ENST00000508641 ESYT2A0FGR8 921 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 ZEB2O60315 1214 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 FOSP01100 380 aaPredicted RBP16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 GNA11P29992 359 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 NLRP5P59047 1200 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 NKX3-2P78367 333 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 RABEP1Q15276 862 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 XRRA1Q6P2D8 792 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 CCDC148Q8NFR7 591 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 SH3GLB2Q9NR46 395 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 ALPK3Q96L96 1907 aa16.8■□□□□ 0.28
SH3TC1-216ENST00000508641 H0YGN5 161 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 STAM2O75886 525 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 GH1P01241 217 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 MYL3P08590 195 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 CLK2P49760 499 aaKnown RBP16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 CPT1AP50416 773 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 SP2Q02086 613 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 GNPTABQ3T906 1256 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 TEX2Q8IWB9 1127 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 DHX37Q8IY37 1157 aaKnown RBP16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 GLT1D1Q96MS3 346 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 STARD7Q9NQZ5 370 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 ORC3Q9UBD5 711 aaPredicted RBP16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 ATP11BQ9Y2G3 1177 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 NR2E3Q9Y5X4 410 aa16.79■□□□□ 0.28
SH3TC1-216ENST00000508641 MYH7BA7E2Y1 1941 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 RTP1P59025 263 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 TRIM60Q495X7 471 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 NLRX1Q86UT6 975 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 BICD2Q8TD16 824 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 RASGRP4Q8TDF6 673 aa16.78■□□□□ 0.28
SH3TC1-216ENST00000508641 ZSCAN31Q96LW9 406 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms