RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 TMEM39AQ9NV64 488 aa17.97■□□□□ 0.47
COL1A1-211ENST00000507689 LRRC37A2A6NM11 1700 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 ARVCFO00192 962 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 TGFB3P10600 412 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 MAGEA10P43363 369 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-211ENST00000507689 ANAPC15P60006 121 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 LAMC2Q13753 1193 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 USP17L6PQ6QN14 398 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 VSIG10LQ86VR7 867 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 DHX37Q8IY37 1157 aaKnown RBP17.96■□□□□ 0.47
COL1A1-211ENST00000507689 TRIM22Q8IYM9 498 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 GPKOWQ92917 476 aaPredicted RBP eCLIP17.96■□□□□ 0.47
COL1A1-211ENST00000507689 MTG1Q9BT17 334 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-211ENST00000507689 LCTP09848 1927 aa17.96■□□□□ 0.47
COL1A1-211ENST00000507689 CNTNAP5Q8WYK1 1306 aa17.96■□□□□ 0.46
COL1A1-211ENST00000507689 A0A1W2PPC1 479 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 RAG1P15918 1043 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 ADD1P35611 737 aaKnown RBP17.95■□□□□ 0.46
COL1A1-211ENST00000507689 ADCY7P51828 1080 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 MDM2Q00987 491 aaPredicted RBP17.95■□□□□ 0.46
COL1A1-211ENST00000507689 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 LY6KQ17RY6 165 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 ANKRD33Q7Z3H0 272 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 NLRX1Q86UT6 975 aa17.95■□□□□ 0.46
COL1A1-211ENST00000507689 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
COL1A1-211ENST00000507689 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
COL1A1-211ENST00000507689 CTAGE5O15320 804 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 CDC27P30260 824 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 BMP8BP34820 402 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 IRX5P78411 483 aaPredicted RBP17.94■□□□□ 0.46
COL1A1-211ENST00000507689 DGKDQ16760 1214 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 PDLIM7Q9NR12 457 aa17.94■□□□□ 0.46
COL1A1-211ENST00000507689 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
COL1A1-211ENST00000507689 SMCO2A6NFE2 343 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 A6NJR5 290 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 MEIS2O14770 477 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 FOSP01100 380 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-211ENST00000507689 SUPT20HL2P0C7V6 817 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 SCG2P13521 617 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 CCT2P78371 535 aaKnown RBP17.93■□□□□ 0.46
COL1A1-211ENST00000507689 FAM47CQ5HY64 1035 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 TMEM63BQ5T3F8 832 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 PCNX4Q63HM2 1172 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 MCTP2Q6DN12 878 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 CCDC62Q6P9F0 684 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 COPS5Q92905 334 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 ZNF274Q96GC6 653 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-211ENST00000507689 CDHR1Q96JP9 859 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 GDF15Q99988 308 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 ALPK3Q96L96 1907 aa17.93■□□□□ 0.46
COL1A1-211ENST00000507689 NOP56O00567 594 aaKnown RBP17.92■□□□□ 0.46
COL1A1-211ENST00000507689 FIBPO43427 364 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 CDKL5O76039 1030 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 ARIH2O95376 493 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 GNA11P29992 359 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
COL1A1-211ENST00000507689 PURAQ00577 322 aaKnown RBP17.92■□□□□ 0.46
COL1A1-211ENST00000507689 NEDD9Q14511 834 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 PFKFB3Q16875 520 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-211ENST00000507689 GIMAP8Q8ND71 665 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-211ENST00000507689 CCDC148Q8NFR7 591 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 AFG1LQ8WV93 481 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 SPATA33Q96N06 139 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 KATNAL1Q9BW62 490 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 SLC26A6Q9BXS9 759 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 RIC8AQ9NPQ8 531 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
COL1A1-211ENST00000507689 MKI67P46013 3256 aaKnown RBP17.92■□□□□ 0.46
COL1A1-211ENST00000507689 PRPF3O43395 683 aaKnown RBP17.91■□□□□ 0.46
COL1A1-211ENST00000507689 GGPS1O95749 300 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 PTGS1P23219 599 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 CDK7P50613 346 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 ARHGAP1Q07960 439 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 SSRP1Q08945 709 aaKnown RBP17.91■□□□□ 0.46
COL1A1-211ENST00000507689 UBE2SQ16763 222 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 IL31RAQ8NI17 732 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 PPTC7Q8NI37 304 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 EMID1Q96A84 441 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-211ENST00000507689 RNF26Q9BY78 433 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-211ENST00000507689 FAM217BQ9NTX9 383 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-211ENST00000507689 PCDHA6Q9UN73 950 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 NOD1Q9Y239 953 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 PCDHA8Q9Y5H6 950 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 FRMPD4Q14CM0 1322 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 NID2Q14112 1375 aa17.91■□□□□ 0.46
COL1A1-211ENST00000507689 STXBP3O00186 592 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 KIAA0355O15063 1070 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 MMP3P08254 477 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 IFNAR1P17181 557 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 ZNF76P36508 570 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 EVCP57679 992 aa17.9■□□□□ 0.46
COL1A1-211ENST00000507689 PSMC6P62333 389 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms