RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CEP128Q6ZU80 1094 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 JAMLQ86YT9 394 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 TEX2Q8IWB9 1127 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 AFAP1L2Q8N4X5 818 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 ANKS4BQ8N8V4 417 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 PLEKHO2Q8TD55 490 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 CHAC2Q8WUX2 184 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 IMPACTQ9P2X3 320 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 NOP58Q9Y2X3 529 aaKnown RBP4.93□□□□□ -1.62
LSM6-205ENST00000507449 COQ6Q9Y2Z9 468 aa4.93□□□□□ -1.62
LSM6-205ENST00000507449 NRDCO43847 1150 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 NPHS1O60500 1241 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 KPNA6O60684 536 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 HPXP02790 462 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 TRHRP34981 398 aaPredicted RBP4.92□□□□□ -1.62
LSM6-205ENST00000507449 RPL11P62913 178 aaKnown RBP4.92□□□□□ -1.62
LSM6-205ENST00000507449 PAK1Q13153 545 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 LSAMPQ13449 338 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 SKOR2Q2VWA4 1001 aaPredicted RBP4.92□□□□□ -1.62
LSM6-205ENST00000507449 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 PPM1KQ8N3J5 372 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 IGSF22Q8N9C0 903 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 PDZD8Q8NEN9 1154 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 NLGN2Q8NFZ4 835 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 SHISA4Q96DD7 197 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 ALG1Q9BT22 464 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 JAM3Q9BX67 310 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 C19orf44Q9H6X5 657 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 BTG4Q9NY30 223 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 MARCH2Q9P0N8 246 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 ANGEL1Q9UNK9 670 aaKnown RBP4.92□□□□□ -1.62
LSM6-205ENST00000507449 RWDD3Q9Y3V2 267 aa4.92□□□□□ -1.62
LSM6-205ENST00000507449 hCG_2014768A0A024R1R8 64 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 WTIPA6NIX2 430 aaPredicted RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 TRAF5O00463 557 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 MYO1BO43795 1136 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 PSPNO60542 156 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 JUNBP17275 347 aaPredicted RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 NAT1P18440 290 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CDKN1CP49918 316 aaPredicted RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 GALK1P51570 392 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 NEK4P51957 841 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CORO7P57737 925 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 PLCL1Q15111 1095 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 NR0B2Q15466 257 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CFAP100Q494V2 611 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 PIK3R6Q5UE93 754 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CEP68Q76N32 757 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 ZC3H7AQ8IWR0 971 aaKnown RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 ANKRD13AQ8IZ07 590 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 ZCRB1Q8TBF4 217 aaKnown RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 PI4K2BQ8TCG2 481 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 LEO1Q8WVC0 666 aaPredicted RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 ORAI3Q9BRQ5 295 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CELF4Q9BZC1 486 aaKnown RBP4.91□□□□□ -1.62
LSM6-205ENST00000507449 CLDND1Q9NY35 253 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 SAMD15Q9P1V8 674 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 ACSL6Q9UKU0 697 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CBLCQ9ULV8 474 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 CTNND2Q9UQB3 1225 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 X6R8D5 127 aa4.91□□□□□ -1.62
LSM6-205ENST00000507449 TCRBV5S4A2TA0A5A2 114 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 CCDC66A2RUB6 948 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 FITM1A5D6W6 292 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 C22orf46C9J442 243 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 H7BY64 318 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 M0R2C6 588 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 CBX4O00257 560 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 PPM1GO15355 546 aaPredicted RBP4.9□□□□□ -1.63
LSM6-205ENST00000507449 EYA4O95677 639 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 FUCA1P04066 466 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 PYGMP11217 842 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 PRKCAP17252 672 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 TACR1P25103 407 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 CNGA1P29973 690 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 SOX5P35711 763 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 GDNFP39905 211 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 GTF2A2P52657 109 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 CHRNEQ04844 493 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 ZNF792Q3KQV3 632 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 HABP4Q5JVS0 413 aaKnown RBP4.9□□□□□ -1.63
LSM6-205ENST00000507449 FSTL4Q6MZW2 842 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 GALNT18Q6P9A2 607 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 SPOCD1Q6ZMY3 1216 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 OVCH1Q7RTY7 1134 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 NLRX1Q86UT6 975 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 TP53INP2Q8IXH6 220 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 STAG1Q8WVM7 1258 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 SYTL4Q96C24 671 aaPredicted RBP4.9□□□□□ -1.63
LSM6-205ENST00000507449 TMEM169Q96HH4 297 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 CHAMP1Q96JM3 812 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.9□□□□□ -1.63
LSM6-205ENST00000507449 ATP8A1Q9Y2Q0 1164 aa4.9□□□□□ -1.63
LSM6-205ENST00000507449 ZNF891A8MT65 544 aaPredicted RBP4.89□□□□□ -1.63
LSM6-205ENST00000507449 B4E1Z4 1266 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 FAM47E-STBD1D6RA91 191 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 PRRG2O14669 202 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 AMY2AP04746 511 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms