RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 SNX29Q8TEQ0 813 aa20.81■□□□□ 0.92
SMN2-206ENST00000506734 STAMQ92783 540 aa20.81■□□□□ 0.92
SMN2-206ENST00000506734 WNK4Q96J92 1243 aa20.81■□□□□ 0.92
SMN2-206ENST00000506734 PNMA5Q96PV4 448 aa20.81■□□□□ 0.92
SMN2-206ENST00000506734 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
SMN2-206ENST00000506734 FRMPD4Q14CM0 1322 aa20.81■□□□□ 0.92
SMN2-206ENST00000506734 ZNF76P36508 570 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 SPIRE1Q08AE8 756 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 ERO1BQ86YB8 467 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 MAF1Q9H063 256 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 BLZF1Q9H2G9 400 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 RMND1Q9NWS8 449 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 HOXC10Q9NYD6 342 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 KDM3AQ9Y4C1 1321 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 SPDYE5A6NIY4 337 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 MSH4O15457 936 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 MYL5Q02045 173 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 HS1BP3Q53T59 392 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 GJA10Q969M2 543 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 TRIM44Q96DX7 344 aaPredicted RBP20.8■□□□□ 0.92
SMN2-206ENST00000506734 CDK5RAP3Q96JB5 506 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 PLIN2Q99541 437 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 ZNF214Q9UL59 606 aaPredicted RBP20.8■□□□□ 0.92
SMN2-206ENST00000506734 STK24Q9Y6E0 443 aa20.8■□□□□ 0.92
SMN2-206ENST00000506734 CXCL11O14625 94 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 RPN1P04843 607 aaKnown RBP20.79■□□□□ 0.92
SMN2-206ENST00000506734 TPM4P67936 248 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
SMN2-206ENST00000506734 KCNB1Q14721 858 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 PLA2G4DQ86XP0 818 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 PROCA1Q8NCQ7 364 aaPredicted RBP20.79■□□□□ 0.92
SMN2-206ENST00000506734 SYTL5Q8TDW5 730 aaPredicted RBP20.79■□□□□ 0.92
SMN2-206ENST00000506734 ELP3Q9H9T3 547 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 BLOC1S4Q9NUP1 217 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 COL20A1Q9P218 1284 aa20.79■□□□□ 0.92
SMN2-206ENST00000506734 A0A0G2JLL6 359 aaPredicted RBP20.78■□□□□ 0.92
SMN2-206ENST00000506734 SPDYE16A6NNV3 312 aaPredicted RBP20.78■□□□□ 0.92
SMN2-206ENST00000506734 ERCC5P28715 1186 aaPredicted RBP20.78■□□□□ 0.92
SMN2-206ENST00000506734 AMPD3Q01432 767 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 TKFCQ3LXA3 575 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 CEP55Q53EZ4 464 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 ARMC9Q7Z3E5 817 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 PRRT2Q7Z6L0 340 aaPredicted RBP20.78■□□□□ 0.92
SMN2-206ENST00000506734 CYP2W1Q8TAV3 490 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 CNKSR2Q8WXI2 1034 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 C7orf25Q9BPX7 421 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 NUDT12Q9BQG2 462 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 KCNH4Q9UQ05 1017 aa20.78■□□□□ 0.92
SMN2-206ENST00000506734 HOXA7P31268 230 aaPredicted RBP20.77■□□□□ 0.92
SMN2-206ENST00000506734 ZNF75DP51815 510 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 PPIL2Q13356 520 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 TMEM132BQ14DG7 1078 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 RAD54LQ92698 747 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 CLMNQ96JQ2 1002 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 HOMER2Q9NSB8 354 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 RNF146Q9NTX7 359 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 VAV3Q9UKW4 847 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 A0A0G2JMZ2 1700 aa20.77■□□□□ 0.92
SMN2-206ENST00000506734 MEIS1O00470 390 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 IRF6O14896 467 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 KLRC4O43908 158 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 RPS6P62753 249 aaKnown RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 TTLL12Q14166 644 aaPredicted RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 ZNF658Q5TYW1 1059 aaPredicted RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 HAUS3Q68CZ6 603 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 SNRNP48Q6IEG0 339 aaKnown RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 SV2BQ7L1I2 683 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 NIPA1Q7RTP0 329 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 ENOX1Q8TC92 643 aaKnown RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 LARP4BQ92615 738 aaKnown RBP20.76■□□□□ 0.91
SMN2-206ENST00000506734 TEX13BQ9BXU2 312 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 TRIM9Q9C026 710 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 TRIM5Q9C035 493 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 RIPK3Q9Y572 518 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 UNCXA6NJT0 531 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 BCRP11274 1271 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 CDC25BP30305 580 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 TREML2Q5T2D2 321 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 LDLRAD1Q5T700 205 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 PCNX4Q63HM2 1172 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 CNNM4Q6P4Q7 775 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 RNF207Q6ZRF8 634 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 MOB2Q70IA6 237 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 SLC5A5Q92911 643 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 OTUD5Q96G74 571 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 MXRA8Q9BRK3 442 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 HSD3B7Q9H2F3 369 aa20.76■□□□□ 0.91
SMN2-206ENST00000506734 RHOBTB3O94955 611 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 CCT6AP40227 531 aaKnown RBP20.75■□□□□ 0.91
SMN2-206ENST00000506734 UBXN2AP68543 259 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 ECM1Q16610 540 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 SLC30A10Q6XR72 485 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 ERMNQ8TAM6 284 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 MRFAP1L1Q96HT8 127 aa20.75■□□□□ 0.91
SMN2-206ENST00000506734 GTPBP4Q9BZE4 634 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms