RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 POLR2AP24928 1970 aaKnown RBP13.67□□□□□ -0.22
LIN54-206ENST00000506560 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 MEIS1O00470 390 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
LIN54-206ENST00000506560 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 IDEP14735 1019 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 USP11P51784 963 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 AP3B2Q13367 1082 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 TMEM139Q8IV31 216 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 MBOAT7Q96N66 472 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 KIAA1024Q9UPX6 916 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 MSH4O15457 936 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 CYP3A7P24462 503 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 PSMC6P62333 389 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 LRRC41Q15345 812 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 TC2NQ8N9U0 490 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 DDX12PQ92771 950 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 WNK4Q96J92 1243 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 DUSP9Q99956 384 aaKnown RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 WDR18Q9BV38 432 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 CUEDC2Q9H467 287 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 EXOC1Q9NV70 894 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 ZNF536O15090 1300 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 RNF225M0QZC1 329 aaPredicted RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 ERCC3P19447 782 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 EPS15P42566 896 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 MTMR2Q13614 643 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 TTI2Q6NXR4 508 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 CCDC150Q8NCX0 1101 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 HOMER2Q9NSB8 354 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 NFIBO00712 420 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 PBX1P40424 430 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 CYP4A11Q02928 519 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 PRKG1Q13976 671 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 KCNJ12Q14500 433 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 ANKRD40Q6AI12 368 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 CCAR2Q8N163 923 aaKnown RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
LIN54-206ENST00000506560 TBC1D7Q9P0N9 293 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
LIN54-206ENST00000506560 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 EML1O00423 815 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 TCP11X2Q5H9J9 407 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 CHURC1Q8WUH1 139 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 RAB34Q9BZG1 259 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 GLT8D2Q9H1C3 349 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 SYNPO2Q9UMS6 1093 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 IGLV3-22A0A075B6J6 115 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
LIN54-206ENST00000506560 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
LIN54-206ENST00000506560 TMX1Q9H3N1 280 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
LIN54-206ENST00000506560 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 N4BP3O15049 544 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 UQCRHP07919 91 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 TNNT1P13805 278 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
LIN54-206ENST00000506560 RBL2Q08999 1139 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 SPP2Q13103 211 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 TNFAIP1Q13829 316 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 CATSPER3Q86XQ3 398 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 MAGEF1Q9HAY2 307 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 RAVER2Q9HCJ3 691 aaKnown RBP13.64□□□□□ -0.23
LIN54-206ENST00000506560 EMILIN3Q9NT22 766 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 MYL1P05976 194 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 SPATA31C1P0DKV0 1188 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
LIN54-206ENST00000506560 MTF1Q14872 753 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 GGA3Q9NZ52 723 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 RGL1Q9NZL6 768 aa13.64□□□□□ -0.23
LIN54-206ENST00000506560 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
LIN54-206ENST00000506560 VCAM1P19320 739 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 ZNF76P36508 570 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 Q4G0T1 1027 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 MUM1L1Q5H9M0 696 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 IL31RAQ8NI17 732 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 ZNF592Q92610 1267 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 HOOK2Q96ED9 719 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 FEM1BQ9UK73 627 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
LIN54-206ENST00000506560 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms