RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 UIMC1Q96RL1 719 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 COG5Q9UP83 839 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 MRVI1Q9Y6F6 885 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 EYSQ5T1H1 3165 aa9.65□□□□□ -0.86
SNF8-204ENST00000506104 KAT6AQ92794 2004 aa9.65□□□□□ -0.87
SNF8-204ENST00000506104 DOCK5Q9H7D0 1870 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 ABCB11O95342 1321 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 NEDD4P46934 1319 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 CCDC171Q6TFL3 1326 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 SIP14410 1827 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 LOC102724159A0A0B4J2E5 919 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 A6NJR5 290 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 PITPNM1O00562 1244 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 ZNF213O14771 459 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 BAIAP3O94812 1187 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 CSPG5O95196 566 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 SELPP16109 830 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 PSEN2P49810 448 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 WDR5P61964 334 aaKnown RBP9.64□□□□□ -0.87
SNF8-204ENST00000506104 MFSD10Q14728 455 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 PWP2Q15269 919 aaKnown RBP9.64□□□□□ -0.87
SNF8-204ENST00000506104 ALX1Q15699 326 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 STXBP2Q15833 593 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 DGKDQ16760 1214 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 TMEM31Q5JXX7 168 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 CNKSR3Q6P9H4 555 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
SNF8-204ENST00000506104 IQCA1Q86XH1 822 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 MCF2L2Q86YR7 1114 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 PNMA1Q8ND90 353 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 CAGE1Q8TC20 777 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 NSUN6Q8TEA1 469 aaKnown RBP9.64□□□□□ -0.87
SNF8-204ENST00000506104 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
SNF8-204ENST00000506104 RMDN3Q96TC7 470 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
SNF8-204ENST00000506104 HDAC6Q9UBN7 1215 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 NCOR1O75376 2440 aa9.64□□□□□ -0.87
SNF8-204ENST00000506104 B4E1Z4 1266 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 KDM4AO75164 1064 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 UPP2O95045 317 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 PARP1P09874 1014 aaKnown RBP9.63□□□□□ -0.87
SNF8-204ENST00000506104 CKBP12277 381 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 PDE1AP54750 535 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 MFAP1P55081 439 aaKnown RBP9.63□□□□□ -0.87
SNF8-204ENST00000506104 ZNF200P98182 395 aaPredicted RBP9.63□□□□□ -0.87
SNF8-204ENST00000506104 IKBKEQ14164 716 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 KIAA0753Q2KHM9 967 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 GPATCH4Q5T3I0 446 aaKnown RBP9.63□□□□□ -0.87
SNF8-204ENST00000506104 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 ADGRF4Q8IZF3 695 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 MYOCDQ8IZQ8 938 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 TTC14Q96N46 770 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 LRFN3Q9BTN0 628 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 DIAPH3Q9NSV4 1193 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 TCP11L1Q9NUJ3 509 aa9.63□□□□□ -0.87
SNF8-204ENST00000506104 MRPL11Q9Y3B7 192 aaKnown RBP9.63□□□□□ -0.87
SNF8-204ENST00000506104 BAZ2BQ9UIF8 2168 aaKnown RBP9.63□□□□□ -0.87
SNF8-204ENST00000506104 WDR19Q8NEZ3 1342 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 NLRC5Q86WI3 1866 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 MICAL3Q7RTP6 2002 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 KCNA5P22460 613 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 EDNRBP24530 442 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 THPOP40225 353 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 ARHGAP1Q07960 439 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 QRICH1Q2TAL8 776 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 CWC27Q6UX04 472 aaKnown RBP9.62□□□□□ -0.87
SNF8-204ENST00000506104 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 HOMER1Q86YM7 354 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 SYTL5Q8TDW5 730 aaPredicted RBP9.62□□□□□ -0.87
SNF8-204ENST00000506104 PIBF1Q8WXW3 757 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 DHX38Q92620 1227 aaKnown RBP9.62□□□□□ -0.87
SNF8-204ENST00000506104 TGS1Q96RS0 853 aaKnown RBP9.62□□□□□ -0.87
SNF8-204ENST00000506104 UBAC1Q9BSL1 405 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 KATNAL1Q9BW62 490 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
SNF8-204ENST00000506104 LAMA4Q16363 1823 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 NBNO60934 754 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 AMHP03971 560 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 NR3C2P08235 984 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 CTSHP09668 335 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 HOXA13P31271 388 aaPredicted RBP9.61□□□□□ -0.87
SNF8-204ENST00000506104 LAMC2Q13753 1193 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 CSPP1Q1MSJ5 1256 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 TCTN1Q2MV58 587 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 CCDC178Q5BJE1 867 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 ZNF618Q5T7W0 954 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 POTEHQ6S545 545 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNF8-204ENST00000506104 KAT2BQ92831 832 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 SPATA33Q96N06 139 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
SNF8-204ENST00000506104 RAD9AQ99638 391 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 MLXIPQ9HAP2 919 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 GTF2IRD1Q9UHL9 959 aa9.61□□□□□ -0.87
SNF8-204ENST00000506104 ABHD14A-ACY1A0A1B0GW23 586 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms