RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 PCDHA2Q9Y5H9 948 aa6.45□□□□□ -1.38
LINC00616-202ENST00000505874 A0A1W2PQU0 124 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 PRRG2O14669 202 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 SGSM2O43147 1006 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 C8BP07358 591 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 LTBRP36941 435 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 KCNC1P48547 511 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 PPP2R2AP63151 447 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 CAP1Q01518 475 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 DDR2Q16832 855 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 ACBD5Q5T8D3 534 aaPredicted RBP6.44□□□□□ -1.38
LINC00616-202ENST00000505874 LIPIQ6XZB0 460 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 SAPCD2Q86UD0 394 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 SEC14L1Q92503 715 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 TMEM169Q96HH4 297 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 CHAMP1Q96JM3 812 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 GMLQ99445 158 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 SYT3Q9BQG1 590 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 SPATA25Q9BR10 227 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 EPN3Q9H201 632 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 RTEL1Q9NZ71 1219 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 PALD1Q9ULE6 856 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 NCANO14594 1321 aa6.44□□□□□ -1.38
LINC00616-202ENST00000505874 E9PSI1 815 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 FOXD2O60548 495 aaPredicted RBP6.43□□□□□ -1.38
LINC00616-202ENST00000505874 DLX2Q07687 328 aaPredicted RBP6.43□□□□□ -1.38
LINC00616-202ENST00000505874 SMAD4Q13485 552 aaKnown RBP6.43□□□□□ -1.38
LINC00616-202ENST00000505874 MROH9Q5TGP6 573 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 ETV3LQ6ZN32 361 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 MILR1Q7Z6M3 343 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 FAM26EQ8N5C1 309 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 ZBTB8AQ96BR9 441 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 IGSF5Q9NSI5 407 aa6.43□□□□□ -1.38
LINC00616-202ENST00000505874 COA3Q9Y2R0 106 aaPredicted RBP6.43□□□□□ -1.38
LINC00616-202ENST00000505874 KLF4O43474 513 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 CYP2C8P10632 490 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 BUD31P41223 144 aaPredicted RBP6.42□□□□□ -1.38
LINC00616-202ENST00000505874 SLC6A11P48066 632 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 GTF2A2P52657 109 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 CD300LDQ6UXZ3 194 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 RIOX2Q8IUF8 465 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 Q8N1Y9 231 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 GORASP1Q9BQQ3 440 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 IER2Q9BTL4 223 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 PODXL2Q9NZ53 605 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 X6R8D5 127 aa6.42□□□□□ -1.38
LINC00616-202ENST00000505874 CAPNS1P04632 268 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 LSAMPQ13449 338 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 TESK1Q15569 626 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 SLC35F1Q5T1Q4 408 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 NT5DC1Q5TFE4 455 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 KCTD13Q8WZ19 329 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 CLDND1Q9NY35 253 aa6.41□□□□□ -1.38
LINC00616-202ENST00000505874 SH3D21A4FU49 640 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 STAT5AP42229 794 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 STK32CQ86UX6 486 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 MIB1Q86YT6 1006 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 CARFQ8N187 725 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 YIPF4Q9BSR8 244 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 TRIM55Q9BYV6 548 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 USP40Q9NVE5 1235 aa6.4□□□□□ -1.38
LINC00616-202ENST00000505874 SPATA6Q9NWH7 488 aaPredicted RBP6.4□□□□□ -1.38
LINC00616-202ENST00000505874 H7BY64 318 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 DLX3O60479 287 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 SYN1P17600 705 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 MAP4K2Q12851 820 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 RAB33AQ14088 237 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 HSP90AA2PQ14568 343 aaPredicted RBP6.39□□□□□ -1.39
LINC00616-202ENST00000505874 USP53Q70EK8 1073 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 FRMD5Q7Z6J6 570 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 ZC3H18Q86VM9 953 aaKnown RBP6.39□□□□□ -1.39
LINC00616-202ENST00000505874 NTMQ9P121 344 aa6.39□□□□□ -1.39
LINC00616-202ENST00000505874 ADAMTS20P59510 1910 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 HGSO14964 777 aaPredicted RBP6.38□□□□□ -1.39
LINC00616-202ENST00000505874 PRODHO43272 600 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
LINC00616-202ENST00000505874 SARSP49591 514 aaKnown RBP6.38□□□□□ -1.39
LINC00616-202ENST00000505874 ZC3H6P61129 1189 aaKnown RBP6.38□□□□□ -1.39
LINC00616-202ENST00000505874 NAALADL2Q58DX5 795 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 STEAP3Q658P3 488 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 FAM126BQ8IXS8 530 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 LINC00482Q8N8I6 264 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 CXorf38Q8TB03 319 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 TEPSINQ96N21 525 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 AARSD1Q9BTE6 412 aaKnown RBP6.38□□□□□ -1.39
LINC00616-202ENST00000505874 C11orf84Q9BUA3 381 aaPredicted RBP6.38□□□□□ -1.39
LINC00616-202ENST00000505874 PCDHB4Q9Y5E5 795 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 NPFFR2Q9Y5X5 522 aa6.38□□□□□ -1.39
LINC00616-202ENST00000505874 IQCA1LA6NCM1 817 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 PRICKLE3O43900 615 aaPredicted RBP6.37□□□□□ -1.39
LINC00616-202ENST00000505874 MSCO60682 206 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 DGKIO75912 1065 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 STK10O94804 968 aaKnown RBP6.37□□□□□ -1.39
LINC00616-202ENST00000505874 CHRNA2Q15822 529 aa6.37□□□□□ -1.39
LINC00616-202ENST00000505874 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.37□□□□□ -1.39
LINC00616-202ENST00000505874 DDX1Q92499 740 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms