RNA–Protein interactions for RNA: ENST00000504949.1

RHOBTB3-205, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-205ENST00000504949 LETM2Q2VYF4 491 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 FOXD4L3Q6VB84 417 aaPredicted RBP13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 LENG9Q96B70 501 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 ERO1AQ96HE7 468 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 GBP4Q96PP9 640 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 FTOQ9C0B1 505 aaKnown RBP eCLIP13.53□□□□□ -0.242e-8■□□□□ 8.8
RHOBTB3-205ENST00000504949 CFAP45Q9UL16 551 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 GABRQQ9UN88 632 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
RHOBTB3-205ENST00000504949 MEIS1O00470 390 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 RGS20O76081 388 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 TDP2O95551 362 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 ITGB5P18084 799 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 ATP2B1P20020 1258 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 CCND2P30279 289 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 RGS2P41220 211 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 FLT3LGP49771 235 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 PRKCZQ05513 592 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 PTPAQ15257 358 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 Q4G0T1 1027 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 CEP55Q53EZ4 464 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 ANO1Q5XXA6 986 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 MSL3Q8N5Y2 521 aaKnown RBP13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 POLR3EQ9NVU0 708 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 SLC5A4Q9NY91 659 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 TFIP11Q9UBB9 837 aaKnown RBP13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 SRRDQ9UH36 339 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 CENPFP49454 3210 aa13.52□□□□□ -0.25
RHOBTB3-205ENST00000504949 TCHHQ07283 1943 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 ASB14A6NK59 587 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 SLC37A4O43826 429 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 EIF3JO75822 258 aaKnown RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 STAM2O75886 525 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 MYCLP12524 364 aaPredicted RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 CYP2B6P20813 491 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 KRT85P78386 507 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 IRF5Q13568 498 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 SF3A1Q15459 793 aaKnown RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 ZNF174Q15697 407 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 STXBP2Q15833 593 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 NIPA1Q7RTP0 329 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 INPP4AQ96PE3 977 aaPredicted RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 NAP1L4Q99733 375 aaKnown RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 APBA2Q99767 749 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 MXRA8Q9BRK3 442 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 TINF2Q9BSI4 451 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 FLRT1Q9NZU1 646 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 MORC2Q9Y6X9 1032 aaPredicted RBP13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
RHOBTB3-205ENST00000504949 B4DLN1 442 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 SNAI1O95863 264 aaPredicted RBP13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 HOXD10P28358 340 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 MCM7P33993 719 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 CCL14Q16627 93 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 ARMCX2Q7L311 632 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 LINC00301Q8NCQ3 95 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 SCAND2PQ9GZW5 306 aaPredicted RBP13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 KATNBL1Q9H079 304 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 JADE2Q9NQC1 790 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 RCOR1Q9UKL0 485 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 MCM3APO60318 1980 aa13.5□□□□□ -0.25
RHOBTB3-205ENST00000504949 FOXN1O15353 648 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 ZNF76P36508 570 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 PDE4DQ08499 809 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 PTGDRQ13258 359 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 SLC39A14Q15043 492 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 ARHGEF6Q15052 776 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 PRR16Q569H4 304 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 HAS1Q92839 578 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 MPHOSPH6Q99547 160 aaKnown RBP13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 KCNMB3Q9NPA1 279 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 KCNH7Q9NS40 1196 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 SPATA31C2B4DYI2 1134 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 MSH4O15457 936 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 MAFGO15525 162 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 NEMFO60524 1076 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 YEATS4O95619 227 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 ARP10275 920 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 ICAM3P32942 547 aa13.49□□□□□ -0.25
RHOBTB3-205ENST00000504949 ATP2C1P98194 919 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms