RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ZBED9Q6R2W3 1325 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 CCDC85CA6NKD9 419 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 SMAD7O15105 426 aaKnown RBP5.31□□□□□ -1.56
RFC1-208ENST00000504849 AMHP03971 560 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 MAPKAPK2P49137 400 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 C2orf27AQ580R0 203 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 GALNT18Q6P9A2 607 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 ZNF761Q86XN6 746 aaPredicted RBP5.31□□□□□ -1.56
RFC1-208ENST00000504849 JMYQ8N9B5 988 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 SYTL5Q8TDW5 730 aaPredicted RBP5.31□□□□□ -1.56
RFC1-208ENST00000504849 THAP3Q8WTV1 239 aaPredicted RBP5.31□□□□□ -1.56
RFC1-208ENST00000504849 JDP2Q8WYK2 163 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 LRRC3Q9BY71 257 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 KANSL2Q9H9L4 492 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 PLAAQ9Y263 795 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 NCOA2Q15596 1464 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
RFC1-208ENST00000504849 MTUS2Q5JR59 1369 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 PTPN23Q9H3S7 1636 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 KIF13AQ9H1H9 1805 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 UPK3BL1B0FP48 263 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 UPK3BL2E5RIL1 263 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 PEX14O75381 377 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 DEKP35659 375 aaKnown RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 ARL4AP40617 200 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 GIPRP48546 466 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 LIG3P49916 1009 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 TBX4P57082 545 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 RPS26P62854 115 aaKnown RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 TCEA2Q15560 299 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 SMN1Q16637 294 aaKnown RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 SNAP47Q5SQN1 464 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 FAM196AQ6ZSG2 479 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 SLCO6A1Q86UG4 719 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 CCDC84Q86UT8 332 aaPredicted RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 FMNL3Q8IVF7 1028 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 CHST13Q8NET6 341 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 ZNF669Q96BR6 464 aaPredicted RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 KREMEN1Q96MU8 473 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 HOMER2Q9NSB8 354 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 ACTR10Q9NZ32 417 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 UBP1Q9NZI7 540 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 ADAM30Q9UKF2 790 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
RFC1-208ENST00000504849 HCFC2Q9Y5Z7 792 aa5.3□□□□□ -1.56
RFC1-208ENST00000504849 EHBP1L1Q8N3D4 1523 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 PF4P02776 101 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 PRKCAP17252 672 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 SQSTM1Q13501 440 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 CAMK2GQ13555 558 aaPredicted RBP5.29□□□□□ -1.56
RFC1-208ENST00000504849 SEPT6Q14141 434 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 TARBP2Q15633 366 aaKnown RBP5.29□□□□□ -1.56
RFC1-208ENST00000504849 FXNQ16595 210 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 CLEC16AQ2KHT3 1053 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 ZC3H14Q6PJT7 736 aaKnown RBP5.29□□□□□ -1.56
RFC1-208ENST00000504849 CCDC146Q8IYE0 955 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 CELF2-AS1Q8N7Q2 184 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 GOLM1Q8NBJ4 401 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 KISS1RQ969F8 398 aaPredicted RBP5.29□□□□□ -1.56
RFC1-208ENST00000504849 TCTN2Q96GX1 697 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 C8orf48Q96LL4 319 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 CRBNQ96SW2 442 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 ASPNQ9BXN1 380 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 ACSL6Q9UKU0 697 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 TCFL5Q9UL49 500 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 TAF6LQ9Y6J9 622 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 FHOD3Q2V2M9 1422 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 MYOM3Q5VTT5 1437 aa5.29□□□□□ -1.56
RFC1-208ENST00000504849 PRDM2Q13029 1718 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 CUL7Q14999 1698 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 PRC1O43663 620 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 HSPA5P11021 654 aaKnown RBP5.28□□□□□ -1.56
RFC1-208ENST00000504849 IMPDH2P12268 514 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 CYP4F8P98187 520 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 EXOSC10Q01780 885 aaKnown RBP5.28□□□□□ -1.56
RFC1-208ENST00000504849 FAM160A1Q05DH4 1040 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 CCSAPQ6IQ19 270 aaPredicted RBP5.28□□□□□ -1.56
RFC1-208ENST00000504849 AGMOQ6ZNB7 445 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 ENOX1Q8TC92 643 aaKnown RBP5.28□□□□□ -1.56
RFC1-208ENST00000504849 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 TCEAL9Q9UHQ7 104 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 PCDHB5Q9Y5E4 795 aa5.28□□□□□ -1.56
RFC1-208ENST00000504849 HECW1Q76N89 1606 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 WTIPA6NIX2 430 aaPredicted RBP5.27□□□□□ -1.57
RFC1-208ENST00000504849 F6X3S4 739 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 CHD1O14646 1710 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 FKTNO75072 461 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 PMLP29590 882 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 CRKP46108 304 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 ZNF165P49910 485 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 NAIPQ13075 1403 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 NMIQ13287 307 aaPredicted RBP5.27□□□□□ -1.57
RFC1-208ENST00000504849 MAP3K11Q16584 847 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 MTERF2Q49AM1 385 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 SMG6Q86US8 1419 aaKnown RBP5.27□□□□□ -1.57
RFC1-208ENST00000504849 REXO1Q8N1G1 1221 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms