RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 H3BQ06 376 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 NBNO60934 754 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 GJB5O95377 273 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 ZNF286BP0CG31 522 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 ERVK-21P61565 698 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 GPNMBQ14956 572 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 PWP2Q15269 919 aaKnown RBP8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 ZMYM1Q5SVZ6 1142 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 C20orf194Q5TEA3 1177 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 VPS53Q5VIR6 699 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 C7orf31Q8N865 590 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 FBXO22Q8NEZ5 403 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 MS4A3Q96HJ5 214 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 CTAGE1Q96RT6 745 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 TMEM47Q9BQJ4 181 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 C17orf80Q9BSJ5 609 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 HDAC6Q9UBN7 1215 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 TRIP12Q14669 1992 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 SIP14410 1827 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 ABHD14A-ACY1A0A1B0GW23 586 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 B4DLN1 442 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 FOXP2O15409 715 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 GALR2O43603 387 aaPredicted RBP8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 SORBS3O60504 671 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 GH1P01241 217 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 GOLGA8HP0CJ92 632 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 PDHBP11177 359 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 TOP1P11387 765 aaKnown RBP8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 CKBP12277 381 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 EDNRBP24530 442 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 MRE11P49959 708 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 MRPL12P52815 198 aaKnown RBP8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 IKBKEQ14164 716 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 LY6KQ17RY6 165 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 LEXMQ3ZCV2 418 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 BTNL9Q6UXG8 535 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 RAD9AQ99638 391 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 CPVLQ9H3G5 476 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 LMCD1Q9NZU5 365 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 PCDHB13Q9Y5F0 798 aa8.1□□□□□ -1.11
NPIPB3-203ENST00000504841 BRWD1Q9NSI6 2320 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 CHD9Q3L8U1 2897 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 WDR19Q8NEZ3 1342 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 ORC4O43929 436 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 CSPG5O95196 566 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 CXCL10P02778 98 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 AMHP03971 560 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 ALADP13716 330 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 CASTP20810 708 aaKnown RBP8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 PSEN2P49810 448 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 HAND2P61296 217 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 ZNF200P98182 395 aaPredicted RBP8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 ARHGAP1Q07960 439 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 ZNF543Q08ER8 600 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 MFSD10Q14728 455 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 KIAA0753Q2KHM9 967 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 ZNF618Q5T7W0 954 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 CCDC62Q6P9F0 684 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 DHX37Q8IY37 1157 aaKnown RBP8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 PI4K2BQ8TCG2 481 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 KAT2BQ92831 832 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 WNT8BQ93098 351 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 DCTPP1Q9H773 170 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 RCAN3Q9UKA8 241 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 PNMA2Q9UL42 364 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 CHD7Q9P2D1 2997 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.11
NPIPB3-203ENST00000504841 TTC41PQ6P2S7 1318 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 DCXO43602 365 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 DHX16O60231 1041 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 EFCAB14O75071 495 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 LGR5O75473 907 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 PARNO95453 639 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 NOVP48745 357 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 NHLH1Q02575 133 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 RBL2Q08999 1139 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 CDC37Q16543 378 aaPredicted RBP8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 DGKDQ16760 1214 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 PTPROQ16827 1216 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 TIGD5Q53EQ6 642 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 TCEAL5Q5H9L2 206 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 SESTD1Q86VW0 696 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 DBF4BQ8NFT6 615 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 SYTL5Q8TDW5 730 aaPredicted RBP8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 TBC1D5Q92609 795 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 MRPL38Q96DV4 380 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 TAAR1Q96RJ0 339 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 YME1L1Q96TA2 773 aa8.08□□□□□ -1.12
NPIPB3-203ENST00000504841 KATNAL1Q9BW62 490 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms