RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 HMGCS2P54868 508 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 TPM4P67936 248 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 SETQ01105 290 aaPredicted RBP14.95□□□□□ -0.02
LMNA-220ENST00000504687 MYL5Q02045 173 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 SPIRE1Q08AE8 756 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 GRB10Q13322 594 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 COBLL1Q53SF7 1204 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 XRRA1Q6P2D8 792 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 ENOX1Q8TC92 643 aaKnown RBP14.95□□□□□ -0.02
LMNA-220ENST00000504687 ZNF214Q9UL59 606 aaPredicted RBP14.95□□□□□ -0.02
LMNA-220ENST00000504687 KCNH4Q9UQ05 1017 aa14.95□□□□□ -0.02
LMNA-220ENST00000504687 A0A0G2JLL6 359 aaPredicted RBP14.94□□□□□ -0.02
LMNA-220ENST00000504687 MEIS1O00470 390 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 BIN1O00499 593 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 IRF6O14896 467 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 AP5Z1O43299 807 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 CDC25AP30304 524 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 HOXA13P31271 388 aaPredicted RBP14.94□□□□□ -0.02
LMNA-220ENST00000504687 PPP1R2P41236 205 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 AFMP43652 599 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 PPIL2Q13356 520 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 LDLRAD1Q5T700 205 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 PRRT2Q7Z6L0 340 aaPredicted RBP14.94□□□□□ -0.02
LMNA-220ENST00000504687 AOPEPQ8N6M6 819 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 MB21D1Q8N884 522 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 ZNF526Q8TF50 670 aaPredicted RBP14.94□□□□□ -0.02
LMNA-220ENST00000504687 TBC1D5Q92609 795 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 SLC5A5Q92911 643 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 ATG4CQ96DT6 458 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 MRFAP1L1Q96HT8 127 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 PNMA5Q96PV4 448 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 BLOC1S4Q9NUP1 217 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 CTDP1Q9Y5B0 961 aaPredicted RBP14.94□□□□□ -0.02
LMNA-220ENST00000504687 LOXHD1Q8IVV2 1947 aa14.94□□□□□ -0.02
LMNA-220ENST00000504687 RHOBTB3O94955 611 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
LMNA-220ENST00000504687 CEP55Q53EZ4 464 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 PRR16Q569H4 304 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 ZNF658Q5TYW1 1059 aaPredicted RBP14.93□□□□□ -0.02
LMNA-220ENST00000504687 PCNX4Q63HM2 1172 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 HAUS3Q68CZ6 603 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.93□□□□□ -0.02
LMNA-220ENST00000504687 ARMC9Q7Z3E5 817 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 GRAMD1CQ8IYS0 662 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 LRRC15Q8TF66 581 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 TEX13BQ9BXU2 312 aa14.93□□□□□ -0.02
LMNA-220ENST00000504687 RAVER2Q9HCJ3 691 aaKnown RBP14.93□□□□□ -0.02
LMNA-220ENST00000504687 PVALEFA0A1B0GWK0 134 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 POTEMA6NI47 508 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 NFIBO00712 420 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 MSH4O15457 936 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 KLRC4O43908 158 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 MARCH6O60337 910 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 TPM3P06753 285 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 RPA1P27694 616 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 ZNF75DP51815 510 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 FKBP1BP68106 108 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 PPP2R5CQ13362 524 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 DGKZQ13574 1117 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 CUL4BQ13620 913 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 B3GNT9Q6UX72 402 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 SV2BQ7L1I2 683 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 FCHSD1Q86WN1 690 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 RASSF8Q8NHQ8 419 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 ERMNQ8TAM6 284 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 SYTL5Q8TDW5 730 aaPredicted RBP14.92□□□□□ -0.02
LMNA-220ENST00000504687 SNX29Q8TEQ0 813 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 LARP4BQ92615 738 aaKnown RBP14.92□□□□□ -0.02
LMNA-220ENST00000504687 RAD54LQ92698 747 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 TRIM44Q96DX7 344 aaPredicted RBP14.92□□□□□ -0.02
LMNA-220ENST00000504687 CDK5RAP3Q96JB5 506 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 TRERF1Q96PN7 1200 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 RIT2Q99578 217 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 POLR3CQ9BUI4 534 aaPredicted RBP14.92□□□□□ -0.02
LMNA-220ENST00000504687 TRIM9Q9C026 710 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 HSD3B7Q9H2F3 369 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 VAV3Q9UKW4 847 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 FZD1Q9UP38 647 aa14.92□□□□□ -0.02
LMNA-220ENST00000504687 A0A087WWV3 80 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 SPDYE16A6NNV3 312 aaPredicted RBP14.91□□□□□ -0.02
LMNA-220ENST00000504687 PPP1R3GB7ZBB8 358 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 PSMD10O75832 226 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 ALAS1P13196 640 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 TAL1P17542 331 aaPredicted RBP14.91□□□□□ -0.02
LMNA-220ENST00000504687 ZNF76P36508 570 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 FOXR2Q6PJQ5 311 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 CHST13Q8NET6 341 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 CCDC47Q96A33 483 aaKnown RBP14.91□□□□□ -0.02
LMNA-220ENST00000504687 MXRA8Q9BRK3 442 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 WDR11Q9BZH6 1224 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 COL20A1Q9P218 1284 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 UBIAD1Q9Y5Z9 338 aa14.91□□□□□ -0.02
LMNA-220ENST00000504687 ZNF18P17022 549 aa14.9□□□□□ -0.02
LMNA-220ENST00000504687 RPS6P62753 249 aaKnown RBP14.9□□□□□ -0.02
LMNA-220ENST00000504687 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
LMNA-220ENST00000504687 MUM1L1Q5H9M0 696 aa14.9□□□□□ -0.02
LMNA-220ENST00000504687 RNF207Q6ZRF8 634 aa14.9□□□□□ -0.02
LMNA-220ENST00000504687 OTOP1Q7RTM1 612 aa14.9□□□□□ -0.02
LMNA-220ENST00000504687 CPXCR1Q8N123 301 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms