RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
COL4A5-207ENST00000504541 CCNL1Q9UK58 526 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-207ENST00000504541 ZBTB1Q9Y2K1 713 aa7.49□□□□□ -1.21
COL4A5-207ENST00000504541 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
COL4A5-207ENST00000504541 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
COL4A5-207ENST00000504541 FAM170BA6NMN3 283 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 LRIG2O94898 1065 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 PCCAP05165 728 aaPredicted RBP7.48□□□□□ -1.21
COL4A5-207ENST00000504541 YARSP54577 528 aaKnown RBP7.48□□□□□ -1.21
COL4A5-207ENST00000504541 CHMP4BP1P59074 171 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 NKG7Q16617 165 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 HSP90AB4PQ58FF6 505 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 CEP85Q6P2H3 762 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 TTLL7Q6ZT98 887 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 ARHGAP27Q6ZUM4 889 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 MCATQ8IVS2 390 aaKnown RBP7.48□□□□□ -1.21
COL4A5-207ENST00000504541 SLITRK4Q8IW52 837 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 ZNF34Q8IZ26 560 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 TOP6BLQ8N6T0 577 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 MFSD2AQ8NA29 543 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 FLAD1Q8NFF5 587 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 SSH3Q8TE77 659 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 SPATA32Q96LK8 384 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 FERD3LQ96RJ6 166 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 MEIS3Q99687 375 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 PLA2G12BQ9BX93 195 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 CWC25Q9NXE8 425 aaPredicted RBP7.48□□□□□ -1.21
COL4A5-207ENST00000504541 ZNF652Q9Y2D9 606 aa7.48□□□□□ -1.21
COL4A5-207ENST00000504541 CICQ96RK0 1608 aaPredicted RBP7.48□□□□□ -1.21
COL4A5-207ENST00000504541 TOGARAM1Q9Y4F4 1720 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 CST3P01034 146 aaPredicted RBP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 TNNI2P48788 182 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 CLCQ05315 142 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 RAD51AP2Q09MP3 1159 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 SLBPQ14493 270 aaKnown RBP eCLIP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 RABL6Q3YEC7 729 aaPredicted RBP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 PRAMEF13Q5VWM6 474 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 SIRT2Q8IXJ6 389 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 REXO1Q8N1G1 1221 aaKnown RBP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 ACSF2Q96CM8 615 aaPredicted RBP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 MYD88Q99836 296 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 LRRC4CQ9HCJ2 640 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 NARFQ9UHQ1 456 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 EFR3BQ9Y2G0 817 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 NOP58Q9Y2X3 529 aaKnown RBP7.47□□□□□ -1.21
COL4A5-207ENST00000504541 ITGB4P16144 1822 aa7.47□□□□□ -1.21
COL4A5-207ENST00000504541 VIRMAQ69YN4 1812 aaKnown RBP7.46□□□□□ -1.21
COL4A5-207ENST00000504541 LEFTY1O75610 366 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 CAMTA2O94983 1202 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 NBPF7P0C2Y1 421 aaPredicted RBP7.46□□□□□ -1.22
COL4A5-207ENST00000504541 CAP2P40123 477 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 CASP7P55210 303 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 NUCB1Q02818 461 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 TXNRD1Q16881 649 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 TMEM201Q5SNT2 666 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 ZNF765Q7L2R6 523 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 PTF1AQ7RTS3 328 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
COL4A5-207ENST00000504541 LINC00116Q8NCU8 138 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 CPLX3Q8WVH0 158 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 MIPEPQ99797 713 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 DPH2Q9BQC3 489 aaPredicted RBP7.46□□□□□ -1.22
COL4A5-207ENST00000504541 DUSP23Q9BVJ7 150 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.22
COL4A5-207ENST00000504541 CDHR2Q9BYE9 1310 aa7.46□□□□□ -1.22
COL4A5-207ENST00000504541 CHURC1-FNTBB4DL54 471 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 CYP26A1O43174 497 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 HYAL3O43820 417 aaPredicted RBP7.45□□□□□ -1.22
COL4A5-207ENST00000504541 IGSF3O75054 1194 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 CSF1RP07333 972 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 YBX3P16989 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
COL4A5-207ENST00000504541 GRIK1P39086 918 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 COL9A2Q14055 689 aaPredicted RBP7.45□□□□□ -1.22
COL4A5-207ENST00000504541 LRRFIP1Q32MZ4 808 aaKnown RBP7.45□□□□□ -1.22
COL4A5-207ENST00000504541 SLC10A5Q5PT55 438 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 PPP1R42Q7Z4L9 355 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 NLRP10Q86W26 655 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 PHACTR4Q8IZ21 702 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 GATA6Q92908 595 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 EHMT1Q9H9B1 1298 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 GINM1Q9NU53 330 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 PIM2Q9P1W9 311 aa7.45□□□□□ -1.22
COL4A5-207ENST00000504541 NHSQ6T4R5 1651 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 ATE1O95260 518 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 PIP4K2AP48426 406 aaPredicted RBP7.44□□□□□ -1.22
COL4A5-207ENST00000504541 HLFQ16534 295 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 LETMD1Q6P1Q0 360 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 CHD1LQ86WJ1 897 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 ERC1Q8IUD2 1116 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 ZDHHC13Q8IUH4 622 aa7.44□□□□□ -1.22
COL4A5-207ENST00000504541 KAZALD1Q96I82 304 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms