RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 INCENPQ9NQS7 918 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 RBM47A0AV96 593 aaKnown RBP14.98□□□□□ -0.01
LSM6-204ENST00000504181 GRM6O15303 877 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 ALDH5A1P51649 535 aaPredicted RBP14.98□□□□□ -0.01
LSM6-204ENST00000504181 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
LSM6-204ENST00000504181 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
LSM6-204ENST00000504181 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 ZNF618Q5T7W0 954 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 DBF4BQ8NFT6 615 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 CHMP4CQ96CF2 233 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 RIPOR3Q96MK2 946 aa14.98□□□□□ -0.01
LSM6-204ENST00000504181 TMEM232C9JQI7 657 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 EYA4O95677 639 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 FDX1P10109 184 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 BMP3P12645 472 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 SNAP25P60880 206 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 IKQ13123 557 aaPredicted RBP14.97□□□□□ -0.01
LSM6-204ENST00000504181 ADAM15Q13444 863 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 MCTP2Q6DN12 878 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 TRAF7Q6Q0C0 670 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
LSM6-204ENST00000504181 WNT8BQ93098 351 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 LMAN2LQ9H0V9 348 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 CEP250Q9BV73 2442 aa14.97□□□□□ -0.01
LSM6-204ENST00000504181 NKRFO15226 690 aaKnown RBP eCLIP14.96□□□□□ -0.01
LSM6-204ENST00000504181 RASA1P20936 1047 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 STAT2P52630 851 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 PTPN21Q16825 1174 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 CTR9Q6PD62 1173 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 SESTD1Q86VW0 696 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 TMEM105Q8N8V8 129 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 SMRP1Q8NCR6 262 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.01
LSM6-204ENST00000504181 USP15Q9Y4E8 981 aaPredicted RBP14.96□□□□□ -0.01
LSM6-204ENST00000504181 GOLIM4O00461 696 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 BCAR3O75815 825 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 ICAM3P32942 547 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 PDE4BQ07343 736 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 TRIM71Q2Q1W2 868 aaKnown RBP14.95□□□□□ -0.02
LSM6-204ENST00000504181 TOP1MTQ969P6 601 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
LSM6-204ENST00000504181 CLEC1BQ9P126 229 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 HDAC6Q9UBN7 1215 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 ADD3Q9UEY8 706 aaKnown RBP14.95□□□□□ -0.02
LSM6-204ENST00000504181 GTF2IRD1Q9UHL9 959 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
LSM6-204ENST00000504181 MYH6P13533 1939 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 LOXHD1Q8IVV2 1947 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 TXNP10599 105 aaKnown RBP14.94□□□□□ -0.02
LSM6-204ENST00000504181 PTK7Q13308 1070 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
LSM6-204ENST00000504181 SLFN13Q68D06 897 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 ZBTB33Q86T24 672 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 RPAP2Q8IXW5 612 aaPredicted RBP14.94□□□□□ -0.02
LSM6-204ENST00000504181 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 FIBCD1Q8N539 461 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 GMCL1P1Q8NEA9 526 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 KAT2BQ92831 832 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 DNAJC2Q99543 621 aaKnown RBP14.94□□□□□ -0.02
LSM6-204ENST00000504181 C11orf84Q9BUA3 381 aaPredicted RBP14.94□□□□□ -0.02
LSM6-204ENST00000504181 MKNK2Q9HBH9 465 aa14.94□□□□□ -0.02
LSM6-204ENST00000504181 FANCMQ8IYD8 2048 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 ZBED9Q6R2W3 1325 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 EMSYQ7Z589 1322 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 IGKV6D-41A0A0C4DH26 115 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 C5orf67F2Z3F1 127 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 MMP3P08254 477 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 SLFN5Q08AF3 891 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 COASYQ13057 564 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 ADGRD2Q7Z7M1 963 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 AACSQ86V21 672 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 FAM160B2Q86V87 743 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 C7orf31Q8N865 590 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 SCFD2Q8WU76 684 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 ALG1Q9BT22 464 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 IFIH1Q9BYX4 1025 aaKnown RBP14.93□□□□□ -0.02
LSM6-204ENST00000504181 CCPG1Q9ULG6 757 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 BARX2Q9UMQ3 279 aaPredicted RBP14.93□□□□□ -0.02
LSM6-204ENST00000504181 SLC4A4Q9Y6R1 1079 aa14.93□□□□□ -0.02
LSM6-204ENST00000504181 USP24Q9UPU5 2620 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 PTPDC1A2A3K4 754 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 ARIH2O95376 493 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 MMP1P03956 469 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 RB1P06400 928 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 BMPR1AP36894 532 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 ZNF200P98182 395 aaPredicted RBP14.92□□□□□ -0.02
LSM6-204ENST00000504181 PDE4DQ08499 809 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 PLEKHG4Q58EX7 1191 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 KIAA2013Q8IYS2 634 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 CHURC1Q8WUH1 139 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 AFG1LQ8WV93 481 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 MKL1Q969V6 931 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 SPTBN2O15020 2390 aa14.92□□□□□ -0.02
LSM6-204ENST00000504181 CHGBP05060 677 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 LINC00271P0C7V0 271 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 ADD2P35612 726 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 PUM1Q14671 1186 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms