RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 TMEM63CQ9P1W3 806 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 MYL3P08590 195 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RASSF2P50749 326 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 YWHAGP61981 247 aaKnown RBP eCLIP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RBM6P78332 1123 aaKnown RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RAB44Q7Z6P3 723 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 COPRSQ9NQ92 184 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 METP08581 1390 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MEIS1O00470 390 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MED7O43513 233 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 H2AFZP0C0S5 128 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ANXA13P27216 316 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ABCD1P33897 745 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MESDQ14696 234 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 BRD3Q15059 726 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 RBBP5Q15291 538 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 JADE1Q6IE81 842 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 RAPH1Q70E73 1250 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 H2AFVQ71UI9 128 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 TBCKQ8TEA7 893 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 CEP170P1Q96L14 293 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 AK8Q96MA6 479 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 PLEKHF1Q96S99 279 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 NCAPGQ9BPX3 1015 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 KANSL2Q9H9L4 492 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ABT1Q9ULW3 272 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 RIPOR2Q9Y4F9 1068 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 USP17L3A6NCW0 530 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 USP17L4A6NCW7 530 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 NR2F2P24468 414 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 TRAPPC10P48553 1259 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM182BQ5T319 152 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MIGA2Q7L4E1 593 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 USP17L1Q7RTZ2 530 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 RNF26Q9BY78 433 aaPredicted RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 WDR11Q9BZH6 1224 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 STK17AQ9UEE5 414 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 SLC12A6Q9UHW9 1150 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 DBNLQ9UJU6 430 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ANGPTL3Q9Y5C1 460 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 BZW2Q9Y6E2 419 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 PRAMEF22A3QJZ6 481 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 LRRC41Q15345 812 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MTERF2Q49AM1 385 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MAP3K21Q5TCX8 1036 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 PNMA8AQ86V59 439 aaPredicted RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM186BQ8IYM0 893 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 NACC1Q96RE7 527 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 TMEM206Q9H813 350 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 KLHL14Q9P2G3 628 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ATF5Q9Y2D1 282 aaPredicted RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 CLIC2O15247 247 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 PRKAB2O43741 272 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 HEXIM1O94992 359 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 KRT1P04264 644 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 NPR1P16066 1061 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 MAPK4P31152 587 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 SNAP25P60880 206 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 GNGT1P63211 74 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 UBE2SQ16763 222 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 COA7Q96BR5 231 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 DHX36Q9H2U1 1008 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 SMYD2Q9NRG4 433 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF233A6NK53 670 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 KIF3CO14782 793 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 TMCO4Q5TGY1 634 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 TTC37Q6PGP7 1564 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ANKARQ7Z5J8 1434 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 UHMK1Q8TAS1 419 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF653Q96CK0 615 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 IFT122Q9HBG6 1241 aa7.81□□□□□ -1.16
SYNPO2-205ENST00000504178 KCNQ4P56696 695 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CDC37Q16543 378 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF658Q5TYW1 1059 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 PARD3BQ8TEW8 1205 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 DYNLL2Q96FJ2 89 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 TUBGCP2Q9BSJ2 902 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 SAMD9LQ8IVG5 1584 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 SH2B2O14492 632 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 SLC4A1P02730 911 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 GCFC2P16383 781 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CASP2P42575 452 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CLNS1AP54105 237 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 LMNB2Q03252 620 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 GRAPQ13588 217 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 NAA35Q5VZE5 725 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 RSRC2Q7L4I2 434 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF589Q86UQ0 364 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 GRAPLQ8TC17 118 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 P2RX5Q93086 422 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 DHTKD1Q96HY7 919 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 USP6P35125 1406 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 USP17L8P0C7I0 530 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 EEPD1Q7L9B9 569 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 LRRC8AQ8IWT6 810 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 RTKN2Q8IZC4 609 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CDHR1Q96JP9 859 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms