RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ARIH2O95376 493 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 SLC16A2P36021 539 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 RPS6P62753 249 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 HTRA4P83105 476 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 PPARAQ07869 468 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 PTK7Q13308 1070 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 GPM6BQ13491 265 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 SYDE2Q5VT97 1194 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 TTBK2Q6IQ55 1244 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 BTNL9Q6UXG8 535 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 C7orf31Q8N865 590 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 SP7Q8TDD2 431 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 CLEC4DQ8WXI8 215 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 PHOX2BQ99453 314 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 POP1Q99575 1024 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 NAPBQ9H115 298 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 NSUN3Q9H649 340 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 ECHDC1Q9NTX5 307 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 CLDND1Q9NY35 253 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 H3BNC9 293 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 LGR5O75473 907 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 GH1P01241 217 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 PTPN5P54829 565 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 KAT2BQ92831 832 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 LRRCC1Q9C099 1032 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 IL17RBQ9NRM6 502 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 HDAC6Q9UBN7 1215 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 MYH7BA7E2Y1 1941 aa18.66■□□□□ 0.58
PDLIM7-210ENST00000503827 NCK2O43639 380 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 NMT2O60551 498 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 COL19A1Q14993 1142 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 HERC4Q5GLZ8 1057 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 ZNF618Q5T7W0 954 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 PRRX2Q99811 253 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 KATNAL1Q9BW62 490 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 MUTYHQ9UIF7 546 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 EMSYQ7Z589 1322 aa18.65■□□□□ 0.58
PDLIM7-210ENST00000503827 MS4A1P11836 297 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 DGKDQ16760 1214 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 TRAF7Q6Q0C0 670 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 PRSS33Q8NF86 280 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 YME1L1Q96TA2 773 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 ALG1Q9BT22 464 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 ATG2AQ2TAZ0 1938 aa18.64■□□□□ 0.57
PDLIM7-210ENST00000503827 PSEN2P49810 448 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 MBTPS1Q14703 1052 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 SMAD2Q15796 467 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 LY6KQ17RY6 165 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 TRIM71Q2Q1W2 868 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 BMP8AQ7Z5Y6 402 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 RPAINQ86UA6 219 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 TMEM192Q8IY95 271 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 DBF4BQ8NFT6 615 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 GPATCH3Q96I76 525 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 GPCPD1Q9NPB8 672 aa18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 FRMPD2Q68DX3 1309 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-210ENST00000503827 TECTAO75443 2155 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 SMARCA5O60264 1052 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 RANBP6O60518 1105 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 PKN1Q16512 942 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 FBXO11Q86XK2 927 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 RNF135Q8IUD6 432 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 EDAQ92838 391 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 ZBTB40Q9NUA8 1239 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
PDLIM7-210ENST00000503827 COL4A6Q14031 1691 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 WDR19Q8NEZ3 1342 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 CCER2I3L3R5 266 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 LTBRP36941 435 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 NOVP48745 357 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 MFSD10Q14728 455 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 KIAA0753Q2KHM9 967 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 WNT8BQ93098 351 aa18.61■□□□□ 0.57
PDLIM7-210ENST00000503827 RSPH10B2B2RC85 870 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 MBTPS2O43462 519 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 RSPH10BP0C881 870 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 CTDSPL2Q05D32 466 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 CLUL1Q15846 466 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 SUGP1Q8IWZ8 645 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 DHX37Q8IY37 1157 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 TOP1MTQ969P6 601 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 PBXIP1Q96AQ6 731 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 SEC62Q99442 399 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 INCENPQ9NQS7 918 aa18.6■□□□□ 0.57
PDLIM7-210ENST00000503827 MYO7AQ13402 2215 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 HAS3O00219 553 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 UPP2O95045 317 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 F2P00734 622 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 TOP1P11387 765 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 ZNF200P98182 395 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 FOXK2Q01167 660 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 CTC1Q2NKJ3 1217 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms