RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FHOD1Q9Y613 1164 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 TNRC6BQ9UPQ9 1833 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PVALEFA0A1B0GWK0 134 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 HNRNPFP52597 415 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZC3H6P61129 1189 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 NFIXQ14938 502 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 WHAMMP3Q1A5X7 153 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PDXDC2PQ6P474 469 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 LRRC8AQ8IWT6 810 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 RBBP8NLQ8NC74 664 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC51Q96ER9 411 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 LZTS2Q9BRK4 669 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 C17orf75Q9HAS0 396 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF212Q9UDV6 495 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF214Q9UL59 606 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PYCARDQ9ULZ3 195 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC189A1A4V9 331 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 ANKRD33BA6NCL7 494 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 ENO4A6NNW6 628 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 PDE6BP35913 854 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SPAG1Q07617 926 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 TMEM62Q0P6H9 643 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 GRM4Q14833 912 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 FAM26DQ5JW98 314 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CDCA2Q69YH5 1023 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CACNA2D4Q7Z3S7 1137 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 USP48Q86UV5 1035 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 MIEF2Q96C03 454 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 NAP1L3Q99457 506 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 ANO2Q9NQ90 1003 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 ORC3Q9UBD5 711 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 FETUBQ9UGM5 382 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 TAF6LQ9Y6J9 622 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 MEIS1O00470 390 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 PLA2G4AP47712 749 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SCARF1Q14162 830 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SUSD4Q5VX71 490 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 BEST2Q8NFU1 509 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 TBC1D31Q96DN5 1066 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SGSM3Q96HU1 749 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC17Q96LX7 622 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 JAKMIP1Q96N16 626 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 MPHOSPH6Q99547 160 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SDF4Q9BRK5 362 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 TIPINQ9BVW5 301 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 IQCGQ9H095 443 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 DISC1Q9NRI5 854 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SFMBT1Q9UHJ3 866 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 ASTN1O14525 1302 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 MAP2K7O14733 419 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 KIF5CO60282 957 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 XRCC5P13010 732 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 FERP16591 822 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SYT1P21579 422 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CMA1P23946 247 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SHMT1P34896 483 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SMTNP53814 917 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 C11orf91Q3C1V1 193 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 Q4G0T1 1027 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CRELD2Q6UXH1 353 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 NEK11Q8NG66 645 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 FAM76AQ8TAV0 307 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 TSC1Q92574 1164 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 C8orf37Q96NL8 207 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 LRRCC1Q9C099 1032 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 VAV3Q9UKW4 847 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 L1RE1Q9UN81 338 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CTAGE15A4D2H0 777 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 BTBD18B2RXH4 712 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 STAM2O75886 525 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 DNAJC8O75937 253 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CTAGE8P0CG41 777 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 NUMBP49757 651 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 NRG1Q02297 640 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 RASGRF1Q13972 1273 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 KCNC3Q14003 757 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 MORC3Q14149 939 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CDC37Q16543 378 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 APOA5Q6Q788 366 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 DHX32Q7L7V1 743 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CTAGE6Q86UF2 777 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CTAGE4Q8IX94 777 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 SLC30A5Q8TAD4 765 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC28BQ9BUN5 200 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 GLT8D2Q9H1C3 349 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 RANBP17Q9H2T7 1088 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 DCP1AQ9NPI6 582 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 HAO1Q9UJM8 370 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 CDC23Q9UJX2 597 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 COL5A1P20908 1838 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 FLOT1O75955 427 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 RHOBTB3O94955 611 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 TXLNAP40222 546 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 PPP2R3AQ06190 1150 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 DYNC1I2Q13409 638 aaKnown RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 MSLNQ13421 630 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 PREPLQ4J6C6 727 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-204ENST00000503468 PPP1R15BQ5SWA1 713 aa3.11□□□□□ -1.91
NEDD4-204ENST00000503468 ALG1LQ6GMV1 187 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms