RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RBSNQ9H1K0 784 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 TNMDQ9H2S6 317 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 SERTAD1Q9UHV2 236 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 BTBD19C9JJ37 291 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 MSH4O15457 936 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 POLR2DO15514 142 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 ITGB5P18084 799 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 TECP42680 631 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 TXKP42681 527 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 BAATQ14032 418 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 KARSQ15046 597 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 SPRYD7Q5W111 196 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 FASTKD5Q7L8L6 764 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 SH3RF1Q7Z6J0 888 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 MCF2L2Q86YR7 1114 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 PDILTQ8N807 584 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 C2orf69Q8N8R5 385 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 TAAR1Q96RJ0 339 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 PTPN18Q99952 460 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 NUDT12Q9BQG2 462 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 PANK2Q9BZ23 570 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 CCSER1Q9C0I3 900 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 A1CFQ9NQ94 594 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 HOXC10Q9NYD6 342 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 FAM13BQ9NYF5 915 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 CYP39A1Q9NYL5 469 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 RBPJLQ9UBG7 517 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 VAV3Q9UKW4 847 aa7.81□□□□□ -1.16
TOPBP1-203ENST00000503464 CCL15-CCL14A0A0B4J2E2 113 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 CTAGE5O15320 804 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 LETM1O95202 739 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 CYP2C8P10632 490 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 CASP1P29466 404 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 STAT3P40763 770 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 IRX3P78415 501 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 MRPS9P82933 396 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 TYRO3Q06418 890 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 GRB10Q13322 594 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PNOCQ13519 176 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PLS1Q14651 629 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PGM5Q15124 567 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 ECM1Q16610 540 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 CCL15Q16663 113 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 Q3C1V9 767 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 TKFCQ3LXA3 575 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PRR16Q569H4 304 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 NSMFQ6X4W1 530 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 RNF207Q6ZRF8 634 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 SAPCD2Q86UD0 394 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 RASAL3Q86YV0 1011 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 RIOX2Q8IUF8 465 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 ELOA2Q8IYF1 753 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 FAM43AQ8N2R8 423 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 SAMD3Q8N6K7 520 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 MB21D1Q8N884 522 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 DHX58Q96C10 678 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 FGD4Q96M96 766 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 AK8Q96MA6 479 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PNMA5Q96PV4 448 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 NAP1L4Q99733 375 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 MOV10L1Q9BXT6 1211 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 SPATC1LQ9H0A9 340 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 TSPY26PQ9H489 355 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 ACAD9Q9H845 621 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 TTC12Q9H892 705 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 SCUBE2Q9NQ36 999 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PXMP2Q9NR77 195 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 DISC1Q9NRI5 854 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 MAP3K20Q9NYL2 800 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 METRNQ9UJH8 293 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 TUBE1Q9UJT0 475 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 PNMA2Q9UL42 364 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 ZSWIM8A7E2V4 1837 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 ZNF236Q9UL36 1845 aa7.8□□□□□ -1.16
TOPBP1-203ENST00000503464 TESPA1A2RU30 521 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 MEIS1O00470 390 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 TBX3O15119 743 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 SLFN14P0C7P3 912 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 ZBTB48P10074 688 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 ARP10275 920 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 CETPP11597 493 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 PLCG1P19174 1290 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 EIF2AK2P19525 551 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 BMP6P22004 513 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 SARSP49591 514 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 GTF2A2P52657 109 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 HUNKP57058 714 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 CNTN2Q02246 1040 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 FSTL1Q12841 308 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 SEMA3FQ13275 785 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 TMEM119Q4V9L6 283 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 CEP55Q53EZ4 464 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 PCNX4Q63HM2 1172 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 B3GNT9Q6UX72 402 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 C11orf57Q6ZUT1 292 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 KCNK18Q7Z418 384 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 ANKRD23Q86SG2 305 aa7.79□□□□□ -1.16
TOPBP1-203ENST00000503464 CABP7Q86V35 215 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms