RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 EFCAB14O75071 495 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 VIPR1P32241 457 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 SRSF3P84103 164 aaKnown RBP8.53□□□□□ -1.04
NIPBL-203ENST00000503274 MESP2Q0VG99 397 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-203ENST00000503274 TMEM132EQ6IEE7 984 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 ZC3H14Q6PJT7 736 aaKnown RBP8.53□□□□□ -1.04
NIPBL-203ENST00000503274 HOMER1Q86YM7 354 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 PEX11GQ96HA9 241 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 MCOLN1Q9GZU1 580 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 RXFP1Q9HBX9 757 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 NCOA5Q9HCD5 579 aaKnown RBP8.53□□□□□ -1.04
NIPBL-203ENST00000503274 NDOR1Q9UHB4 597 aa8.53□□□□□ -1.04
NIPBL-203ENST00000503274 MYOCOSA0A1B0GUC4 107 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 NAT1P18440 290 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 TRIM61Q5EBN2 209 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 GIMAP6Q6P9H5 292 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 MTDHQ86UE4 582 aaKnown RBP8.52□□□□□ -1.05
NIPBL-203ENST00000503274 DCP2Q8IU60 420 aaKnown RBP8.52□□□□□ -1.05
NIPBL-203ENST00000503274 APPBP2Q92624 585 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 FAM84AQ96KN4 292 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 SIRT5Q9NXA8 310 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 PPARGC1AQ9UBK2 798 aaKnown RBP8.52□□□□□ -1.05
NIPBL-203ENST00000503274 TBX22Q9Y458 520 aa8.52□□□□□ -1.05
NIPBL-203ENST00000503274 TLDC2A0PJX2 215 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 PLD2O14939 933 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 GRK2P25098 689 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 GRK3P35626 688 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 PRR5P85299 388 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 GUCY1A3Q02108 690 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 FZD5Q13467 585 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 TMC6Q7Z403 805 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 POU5F2Q8N7G0 328 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 GSTCDQ8NEC7 633 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 SLC7A14Q8TBB6 771 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 EPB41L1Q9H4G0 881 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 FANCLQ9NW38 375 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 SFMBT1Q9UHJ3 866 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 PCDHA8Q9Y5H6 950 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 HCFC2Q9Y5Z7 792 aa8.51□□□□□ -1.05
NIPBL-203ENST00000503274 TEX51A0A1B0GUA7 166 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-203ENST00000503274 PPP1R12AO14974 1030 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-203ENST00000503274 SEMA7AO75326 666 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 DGKIO75912 1065 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 ASMTLO95671 621 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 SOD2P04179 222 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 SLC6A11P48066 632 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 SYNPOQ8N3V7 929 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 KCNN1Q92952 543 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 JAM3Q9BX67 310 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 AP5M1Q9H0R1 490 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 SIT1Q9Y3P8 196 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
NIPBL-203ENST00000503274 FAM47E-STBD1D6RA91 191 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 KCNQ2O43526 872 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 ZBTB7AO95365 584 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 RAPGEF3O95398 923 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 CRTAMO95727 393 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 APPP05067 770 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 PAK1Q13153 545 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 SLC9A5Q14940 896 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 FNDC3BQ53EP0 1204 aaKnown RBP8.49□□□□□ -1.05
NIPBL-203ENST00000503274 SYDE1Q6ZW31 735 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-203ENST00000503274 SEC14L1Q92503 715 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 TSPAN17Q96FV3 270 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 SLC38A3Q99624 504 aa8.49□□□□□ -1.05
NIPBL-203ENST00000503274 TMA7Q9Y2S6 64 aaKnown RBP8.49□□□□□ -1.05
NIPBL-203ENST00000503274 CDC45O75419 566 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 TCEA2Q15560 299 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 CHRNA2Q15822 529 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 ZNF648Q5T619 568 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-203ENST00000503274 C16orf86Q6ZW13 317 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 BRAPQ7Z569 592 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.48□□□□□ -1.05
NIPBL-203ENST00000503274 MAGEB10Q96LZ2 347 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-203ENST00000503274 KCNJ15Q99712 375 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 IPPKQ9H8X2 491 aa8.48□□□□□ -1.05
NIPBL-203ENST00000503274 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-203ENST00000503274 ZCCHC6Q5VYS8 1495 aaKnown RBP8.47□□□□□ -1.05
NIPBL-203ENST00000503274 ARVCFO00192 962 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 SGSM2O43147 1006 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 ZNF200P98182 395 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-203ENST00000503274 STEAP3Q658P3 488 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 PCDH19Q8TAB3 1148 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 SGPP1Q9BX95 441 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 CNTD2Q9H8S5 307 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 TRIM39Q9HCM9 518 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
NIPBL-203ENST00000503274 UNC13AQ9UPW8 1703 aa8.46□□□□□ -1.05
NIPBL-203ENST00000503274 ENPP3O14638 875 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 HGSO14964 777 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-203ENST00000503274 RASGRP1O95267 797 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 TMEM253P0C7T8 217 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 SPIRE1Q08AE8 756 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 LDHDQ86WU2 507 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms