RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 USP17L11C9JVI0 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L18D6R9N7 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L22D6RA61 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L17D6RBQ6 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L19D6RCP7 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L20D6RJB6 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 TEX33O43247 280 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 BMP3P12645 472 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L24Q0WX57 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 FILIP1LQ4L180 1135 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L6PQ6QN14 398 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 GIMAP8Q8ND71 665 aaPredicted RBP12.94□□□□□ -0.34
USP46-204ENST00000503060 CCDC47Q96A33 483 aaKnown RBP12.94□□□□□ -0.34
USP46-204ENST00000503060 PNMA5Q96PV4 448 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 NAP1L4Q99733 375 aaKnown RBP12.94□□□□□ -0.34
USP46-204ENST00000503060 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
USP46-204ENST00000503060 SYNPO2Q9UMS6 1093 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 COMMD10Q9Y6G5 202 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 A0A1W2PRG0 241 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP46-204ENST00000503060 AMPD3Q01432 767 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 SPAG1Q07617 926 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 CEP135Q66GS9 1140 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 BORCS6Q96GS4 357 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 AMNQ9BXJ7 453 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 STK17AQ9UEE5 414 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 PBX1P40424 430 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 ASIC1P78348 528 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
USP46-204ENST00000503060 STIM1Q13586 685 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 KRT31Q15323 416 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 FBXO11Q86XK2 927 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 TMEM139Q8IV31 216 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 TC2NQ8N9U0 490 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 MTMR14Q8NCE2 650 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 HAS1Q92839 578 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 ANO3Q9BYT9 981 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 MYH7BA7E2Y1 1941 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 POTEMA6NI47 508 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 H7C1D1 291 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 COPB2P35606 906 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 GYS2P54840 703 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 SNAP25P60880 206 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 SV2BQ7L1I2 683 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 CDK5RAP3Q96JB5 506 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 PAXBP1Q9Y5B6 917 aa12.93□□□□□ -0.34
USP46-204ENST00000503060 LRRC10BA6NIK2 292 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 MEIS2O14770 477 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 USP11P51784 963 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 PIM2Q9P1W9 311 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 KCNJ18B7U540 433 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 KIF2AO00139 706 aaPredicted RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 PSMA7O14818 248 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 ARHGAP6O43182 974 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 KIF20AO95235 890 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 ADKP55263 362 aaKnown RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 PDE4DQ08499 809 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 KCNJ12Q14500 433 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 MCTP2Q6DN12 878 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 FCHSD1Q86WN1 690 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 SNRNP27Q8WVK2 155 aaKnown RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 DHTKD1Q96HY7 919 aaPredicted RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 MBOAT7Q96N66 472 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 BAG1Q99933 345 aaPredicted RBP12.92□□□□□ -0.34
USP46-204ENST00000503060 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 ZBTB21Q9ULJ3 1066 aa12.92□□□□□ -0.34
USP46-204ENST00000503060 CYP3A7-CYP3A51PA0A087WV96 503 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 CCP110O43303 1012 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 CYP3A7P24462 503 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 CCT6AP40227 531 aaKnown RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 ECE1P42892 770 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 TGFB2P61812 414 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 CXCL9Q07325 125 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 MCM6Q14566 821 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms