RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 FAM26EQ8N5C1 309 aa3.85□□□□□ -1.79
SMAD1-203ENST00000502342 NETO2Q8NC67 525 aa3.85□□□□□ -1.79
SMAD1-203ENST00000502342 ST13P5Q8NFI4 369 aaPredicted RBP3.85□□□□□ -1.79
SMAD1-203ENST00000502342 DACT3Q96B18 629 aaPredicted RBP3.85□□□□□ -1.79
SMAD1-203ENST00000502342 C1orf159Q96HA4 380 aa3.85□□□□□ -1.79
SMAD1-203ENST00000502342 DNAJC2Q99543 621 aaKnown RBP3.85□□□□□ -1.79
SMAD1-203ENST00000502342 SPATA9Q9BWV2 254 aa3.85□□□□□ -1.79
SMAD1-203ENST00000502342 CCDC113Q9H0I3 377 aa3.85□□□□□ -1.79
SMAD1-203ENST00000502342 ARHGEF4Q9NR80 690 aa3.85□□□□□ -1.79
SMAD1-203ENST00000502342 PPARGC1AQ9UBK2 798 aaKnown RBP3.85□□□□□ -1.79
SMAD1-203ENST00000502342 COA3Q9Y2R0 106 aaPredicted RBP3.85□□□□□ -1.79
SMAD1-203ENST00000502342 TRAV20A0A0B4J274 112 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 A0A1B0GTL3 188 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 FAM153BP0C7A2 387 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 COL6A2P12110 1019 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 GTF2A2P52657 109 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 SSRP1Q08945 709 aaKnown RBP3.84□□□□□ -1.79
SMAD1-203ENST00000502342 IFRD2Q12894 506 aaPredicted RBP3.84□□□□□ -1.79
SMAD1-203ENST00000502342 SLC9A5Q14940 896 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 NTRK3Q16288 839 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 FBLN7Q53RD9 439 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 FAM209AQ5JX71 171 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 ACBD5Q5T8D3 534 aaPredicted RBP3.84□□□□□ -1.79
SMAD1-203ENST00000502342 SOGA3Q5TF21 947 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 TCERG1LQ5VWI1 586 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 NBPF6Q5VWK0 638 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 FOXB2Q5VYV0 432 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 SPOCD1Q6ZMY3 1216 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 NLRP10Q86W26 655 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 RBM12BQ8IXT5 1001 aaKnown RBP3.84□□□□□ -1.79
SMAD1-203ENST00000502342 OSBP2Q969R2 916 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 DDX11Q96FC9 970 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 NBPF4Q96M43 638 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 NOX5Q96PH1 765 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 KCNJ15Q99712 375 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 CDC6Q99741 560 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 PHF20Q9BVI0 1012 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 AP5M1Q9H0R1 490 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 PALD1Q9ULE6 856 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 MSRB2Q9Y3D2 182 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 KDM2BQ8NHM5 1336 aa3.84□□□□□ -1.79
SMAD1-203ENST00000502342 ARID1BQ8NFD5 2236 aaPredicted RBP3.84□□□□□ -1.79
SMAD1-203ENST00000502342 PLA2G1BP04054 148 aaKnown RBP3.83□□□□□ -1.8
SMAD1-203ENST00000502342 FBLN1P23142 703 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 IGFBP6P24592 240 aaPredicted RBP3.83□□□□□ -1.8
SMAD1-203ENST00000502342 MAP4K2Q12851 820 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 CD300LDQ6UXZ3 194 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 AMIGO3Q86WK7 504 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 DCP2Q8IU60 420 aaKnown RBP3.83□□□□□ -1.8
SMAD1-203ENST00000502342 SIAH1Q8IUQ4 282 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 TMEM151BQ8IW70 566 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 ZDHHC14Q8IZN3 488 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 NLGN1Q8N2Q7 840 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 SMARCC2Q8TAQ2 1214 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 ZNF526Q8TF50 670 aaPredicted RBP3.83□□□□□ -1.8
SMAD1-203ENST00000502342 ARMC5Q96C12 935 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 TSPAN17Q96FV3 270 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 SRPK1Q96SB4 655 aaKnown RBP3.83□□□□□ -1.8
SMAD1-203ENST00000502342 DNAJC7Q99615 494 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 ZCCHC4Q9H5U6 513 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 TRAF6Q9Y4K3 522 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 PMF1-BGLAPU3KQ54 211 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 X6R8D5 127 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 ASXL2Q76L83 1435 aa3.83□□□□□ -1.8
SMAD1-203ENST00000502342 FGFR1P11362 822 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 STAT5AP42229 794 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 SMAD4Q13485 552 aaKnown RBP3.82□□□□□ -1.8
SMAD1-203ENST00000502342 RASGRF1Q13972 1273 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 MROH9Q5TGP6 573 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 STEAP3Q658P3 488 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 SCUBE1Q8IWY4 988 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 SYT8Q8NBV8 401 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 FNIP1Q8TF40 1166 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 DCAF4Q8WV16 495 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 SEC14L1Q92503 715 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 ZNF669Q96BR6 464 aaPredicted RBP3.82□□□□□ -1.8
SMAD1-203ENST00000502342 YIPF4Q9BSR8 244 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 GPR27Q9NS67 375 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 NPFFR2Q9Y5X5 522 aa3.82□□□□□ -1.8
SMAD1-203ENST00000502342 TRBV23-1A0A0A0MS06 115 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 H7BY64 318 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 FFAR3O14843 346 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 HGSO14964 777 aaPredicted RBP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 SLC27A2O14975 620 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 ADCY3O60266 1144 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 TRIM13O60858 407 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 DGKIO75912 1065 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 INHBBP09529 407 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 GRIN1Q05586 938 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 CACNB2Q08289 660 aaPredicted RBP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 CHRNA2Q15822 529 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 LBX2Q6XYB7 198 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 DPH6Q7L8W6 267 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 B3GNT8Q7Z7M8 397 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 IFNL3Q8IZI9 196 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 MARCH10Q8NA82 808 aaPredicted RBP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 ZBTB38Q8NAP3 1195 aaPredicted RBP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 TP53I13Q8NBR0 393 aaPredicted RBP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 ARRDC4Q8NCT1 418 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms