RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MYADML2A6NDP7 307 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 PHKA2P46019 1235 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 ID4P47928 161 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 CCL23P55773 120 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 RHBDL3P58872 404 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 EFHC2Q5JST6 749 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 CCSAPQ6IQ19 270 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-209ENST00000498708 ASCL5Q7RTU5 278 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 ZGPATQ8N5A5 531 aaKnown RBP6.77□□□□□ -1.33
SPTA1-209ENST00000498708 KLHDC9Q8NEP7 349 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 API5Q9BZZ5 524 aaKnown RBP6.77□□□□□ -1.33
SPTA1-209ENST00000498708 MTIF3Q9H2K0 278 aaKnown RBP6.77□□□□□ -1.33
SPTA1-209ENST00000498708 COPRSQ9NQ92 184 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 HMG20BQ9P0W2 317 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 ZNF236Q9UL36 1845 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 CHD8Q9HCK8 2581 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 TPRP12270 2363 aaKnown RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 PKD1L2Q7Z442 2459 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L15C9J2P7 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L13C9JLJ4 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L11C9JVI0 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L18D6R9N7 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L22D6RA61 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L17D6RBQ6 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L19D6RCP7 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L20D6RJB6 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 OIP5O43482 229 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 CD4P01730 458 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L24Q0WX57 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 TTLL4Q14679 1199 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 SUZ12Q15022 739 aaKnown RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 ZYXQ15942 572 aaKnown RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 TMEM132AQ24JP5 1023 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 MAP7D1Q3KQU3 841 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 SPTY2D1Q68D10 685 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 CATSPERGQ6ZRH7 1159 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 FAM126BQ8IXS8 530 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 RHBDD1Q8TEB9 315 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 ZNF384Q8TF68 577 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 CLUAP1Q96AJ1 413 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 MOV10L1Q9BXT6 1211 aaKnown RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 OXCT2Q9BYC2 517 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-209ENST00000498708 SCN5AQ14524 2016 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 SYNRGQ9UMZ2 1314 aa6.76□□□□□ -1.33
SPTA1-209ENST00000498708 NCOR2Q9Y618 2525 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 GPR75-ASB3A0A0A6YYF3 556 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 H3BQ06 376 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ARVCFO00192 962 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 LDHCP07864 332 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ASNSP08243 561 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ZNF865P0CJ78 1059 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ERCC3P19447 782 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 SOX11P35716 441 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ZP2Q05996 745 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 G3BP1Q13283 466 aaKnown RBP eCLIP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 MVPQ14764 893 aaKnown RBP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 TLR1Q15399 786 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 C4orf17Q53FE4 359 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 USP17L2Q6R6M4 530 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 LBX2Q6XYB7 198 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 MAPKAPK5Q8IW41 473 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 SPATA5Q8NB90 893 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 GDPD5Q8WTR4 605 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ATOH1Q92858 354 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 VTI1AQ96AJ9 217 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 NSUN4Q96CB9 384 aaKnown RBP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 WNT8AQ9H1J5 351 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 DNAJC18Q9H819 358 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 AATFQ9NY61 560 aaKnown RBP eCLIP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 LRP2BPQ9P2M1 347 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 MUTYHQ9UIF7 546 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 GDF2Q9UK05 429 aaPredicted RBP6.75□□□□□ -1.33
SPTA1-209ENST00000498708 AKAP2Q9Y2D5 859 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ZNF536O15090 1300 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ELP1O95163 1332 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 MROH7Q68CQ1 1323 aa6.75□□□□□ -1.33
SPTA1-209ENST00000498708 ZNF292O60281 2723 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 PNMA6EA0A0J9YXQ4 647 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 LCHNA4D1U4 455 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 STRNO43815 780 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 GNAI3P08754 354 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 MSX1P28360 303 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 MCAMP43121 646 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 RARSP54136 660 aaKnown RBP6.74□□□□□ -1.33
SPTA1-209ENST00000498708 GSTO1P78417 241 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
SPTA1-209ENST00000498708 TSGA10IPQ3SY00 556 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 TTC39AQ5SRH9 613 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 BMP8AQ7Z5Y6 402 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 TGFBRAP1Q8WUH2 860 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 PBXIP1Q96AQ6 731 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms