RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CXCL10P02778 98 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 PDE1AP54750 535 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 RBL2Q08999 1139 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
TRAF4-212ENST00000498540 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
TRAF4-212ENST00000498540 GPATCH4Q5T3I0 446 aaKnown RBP17.23■□□□□ 0.35
TRAF4-212ENST00000498540 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 MFSD6Q6ZSS7 791 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 SYTL5Q8TDW5 730 aaPredicted RBP17.23■□□□□ 0.35
TRAF4-212ENST00000498540 ZKSCAN3Q9BRR0 538 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 ZBED2Q9BTP6 218 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
TRAF4-212ENST00000498540 CKBP12277 381 aa17.22■□□□□ 0.35
TRAF4-212ENST00000498540 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
TRAF4-212ENST00000498540 C11orf16Q9NQ32 467 aa17.22■□□□□ 0.35
TRAF4-212ENST00000498540 HDAC6Q9UBN7 1215 aa17.22■□□□□ 0.35
TRAF4-212ENST00000498540 ABCB11O95342 1321 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 GJB5O95377 273 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.35
TRAF4-212ENST00000498540 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-212ENST00000498540 TMEM31Q5JXX7 168 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 NSUN6Q8TEA1 469 aaKnown RBP17.21■□□□□ 0.35
TRAF4-212ENST00000498540 WNT8BQ93098 351 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 ALG1Q9BT22 464 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 SUGCTQ9HAC7 445 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 CD320Q9NPF0 282 aa17.21■□□□□ 0.35
TRAF4-212ENST00000498540 LINC01553A4QN01 128 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 FAM86C2PA6NEL3 165 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 ZNF286BP0CG31 522 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
TRAF4-212ENST00000498540 PSEN2P49810 448 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 STXBP2Q15833 593 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 DGKDQ16760 1214 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 RAD9AQ99638 391 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 LMCD1Q9NZU5 365 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-212ENST00000498540 DDX41Q9UJV9 622 aaKnown RBP17.2■□□□□ 0.34
TRAF4-212ENST00000498540 HCN4Q9Y3Q4 1203 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 MICAL3Q7RTP6 2002 aa17.2■□□□□ 0.34
TRAF4-212ENST00000498540 ABHD14A-ACY1A0A1B0GW23 586 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 PARNO95453 639 aaKnown RBP17.19■□□□□ 0.34
TRAF4-212ENST00000498540 F2P00734 622 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
TRAF4-212ENST00000498540 ERVK-21P61565 698 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 MFSD10Q14728 455 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 TRIM71Q2Q1W2 868 aaKnown RBP17.19■□□□□ 0.34
TRAF4-212ENST00000498540 QRICH1Q2TAL8 776 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 C7orf31Q8N865 590 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 ESR2Q92731 530 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 EMID1Q96A84 441 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-212ENST00000498540 TGS1Q96RS0 853 aaKnown RBP17.19■□□□□ 0.34
TRAF4-212ENST00000498540 IWS1Q96ST2 819 aa17.19■□□□□ 0.34
TRAF4-212ENST00000498540 HAS3O00219 553 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 ZNF200P98182 395 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-212ENST00000498540 PTK7Q13308 1070 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 KIAA0753Q2KHM9 967 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 KATNAL1Q9BW62 490 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 MAF1Q9H063 256 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 RNF41Q9H4P4 317 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-212ENST00000498540 UBE2ZQ9H832 354 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-212ENST00000498540 ARIH1Q9Y4X5 557 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-212ENST00000498540 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
TRAF4-212ENST00000498540 GPR37L1O60883 481 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 KDM4AO75164 1064 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 IKBKEQ14164 716 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 HIC1Q14526 733 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 PPTC7Q8NI37 304 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
TRAF4-212ENST00000498540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
TRAF4-212ENST00000498540 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 OPLAHO14841 1288 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 SORBS3O60504 671 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 EFCAB14O75071 495 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
TRAF4-212ENST00000498540 NR3C2P08235 984 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAF4-212ENST00000498540 FBXO11Q86XK2 927 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 TICAM2Q86XR7 235 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 C17orf80Q9BSJ5 609 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 JMJD4Q9H9V9 463 aa17.16■□□□□ 0.34
TRAF4-212ENST00000498540 MRPL11Q9Y3B7 192 aaKnown RBP17.16■□□□□ 0.34
TRAF4-212ENST00000498540 B4E1Z4 1266 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 ZNF213O14771 459 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 DHX16O60231 1041 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 291.7 ms