RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PNISRQ8TF01 805 aaKnown RBP10.47□□□□□ -0.73
SNX13-212ENST00000498463 FBXW5Q969U6 566 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 COX4I2Q96KJ9 171 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
SNX13-212ENST00000498463 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
SNX13-212ENST00000498463 PCDHGA9Q9Y5G4 932 aaKnown RBP10.47□□□□□ -0.73
SNX13-212ENST00000498463 PCDHGA8Q9Y5G5 932 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 PCDHGA7Q9Y5G6 932 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 PCDHGA6Q9Y5G7 932 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 PCDHGA3Q9Y5H0 932 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 PCDHGA2Q9Y5H1 932 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 CNTNAP4Q9C0A0 1308 aa10.47□□□□□ -0.73
SNX13-212ENST00000498463 TRIM75PA6NK02 468 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 NFICP08651 508 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 BCRP11274 1271 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 VCAM1P19320 739 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 ST5P78524 1137 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 HTRA3P83110 453 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 SAFBQ15424 915 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNX13-212ENST00000498463 RCSD1Q6JBY9 416 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 TOP6BLQ8N6T0 577 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 TTC17Q96AE7 1141 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 SCYL1Q96KG9 808 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 HDAC8Q9BY41 377 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 FAM50BQ9Y247 325 aa10.46□□□□□ -0.73
SNX13-212ENST00000498463 GSTA4O15217 222 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 HOXB4P17483 251 aaPredicted RBP10.45□□□□□ -0.74
SNX13-212ENST00000498463 SCAND1P57086 179 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 CDK5R2Q13319 367 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 ARHGAP44Q17R89 818 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 GPR158Q5T848 1215 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 OTOP1Q7RTM1 612 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 CMIPQ8IY22 773 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 PANK1Q8TE04 598 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 SLC12A9Q9BXP2 914 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 NMRK2Q9NPI5 230 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 MAN1C1Q9NR34 630 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 GPATCH2Q9NW75 528 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 CBLCQ9ULV8 474 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 ZNF652Q9Y2D9 606 aa10.45□□□□□ -0.74
SNX13-212ENST00000498463 HMGB1P1B2RPK0 211 aaPredicted RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 F8W735 103 aaPredicted RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 NRDCO43847 1150 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 GAS2O43903 313 aaKnown RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 H2AFYO75367 372 aaKnown RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 GRK2P25098 689 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 GRK3P35626 688 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 NOP2P46087 812 aaKnown RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 TERF2Q15554 542 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 EEF1DP3Q658K8 133 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 CYB5RLQ6IPT4 315 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 C16orf59Q7L2K0 433 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 AMOTL1Q8IY63 956 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 ELAC2Q9BQ52 826 aaKnown RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 PPCSQ9HAB8 311 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 DDX21Q9NR30 783 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNX13-212ENST00000498463 TOPORSQ9NS56 1045 aaPredicted RBP10.44□□□□□ -0.74
SNX13-212ENST00000498463 ATG3Q9NT62 314 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 INVSQ9Y283 1065 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 PCDHA2Q9Y5H9 948 aa10.44□□□□□ -0.74
SNX13-212ENST00000498463 FAM47E-STBD1D6RA91 191 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 ZRANB2O95218 330 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNX13-212ENST00000498463 HSPA6P17066 643 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 BMP8BP34820 402 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 RBM10P98175 930 aaKnown RBP10.43□□□□□ -0.74
SNX13-212ENST00000498463 INO80DQ53TQ3 878 aaPredicted RBP10.43□□□□□ -0.74
SNX13-212ENST00000498463 FAM83BQ5T0W9 1011 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 EFCAB2Q5VUJ9 269 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 ERAP2Q6P179 960 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 FBLIM1Q8WUP2 373 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 YIPF2Q9BWQ6 316 aa10.43□□□□□ -0.74
SNX13-212ENST00000498463 PPARGC1AQ9UBK2 798 aaKnown RBP10.43□□□□□ -0.74
SNX13-212ENST00000498463 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
SNX13-212ENST00000498463 KLHL33A6NCF5 533 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 RASSF10A6NK89 507 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 WDHD1O75717 1129 aaPredicted RBP10.42□□□□□ -0.74
SNX13-212ENST00000498463 CBX7O95931 251 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 FGAP02671 866 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 SERPINB3P29508 390 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 RAPGEF1Q13905 1077 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 RRP12Q5JTH9 1297 aaKnown RBP10.42□□□□□ -0.74
SNX13-212ENST00000498463 ZFYVE27Q5T4F4 411 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 RASSF3Q86WH2 238 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 TMEM130Q8N3G9 435 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 ZNF655Q8N720 491 aaPredicted RBP10.42□□□□□ -0.74
SNX13-212ENST00000498463 DAGLBQ8NCG7 672 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 ENOX1Q8TC92 643 aaKnown RBP10.42□□□□□ -0.74
SNX13-212ENST00000498463 EZH1Q92800 747 aaPredicted RBP10.42□□□□□ -0.74
SNX13-212ENST00000498463 TRIM11Q96F44 468 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 TEKT5Q96M29 485 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 BOCQ9BWV1 1114 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 PRDM5Q9NQX1 630 aaPredicted RBP10.42□□□□□ -0.74
SNX13-212ENST00000498463 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
SNX13-212ENST00000498463 H7C1D1 291 aa10.41□□□□□ -0.74
SNX13-212ENST00000498463 PMM2O15305 246 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms