RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 ANAPC15P60006 121 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.67
ABCF3-218ENST00000498136 UBE2SQ16763 222 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 C1orf53Q5VUE5 145 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 PCDH10Q9P2E7 1040 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 MYH7BA7E2Y1 1941 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 NID2Q14112 1375 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 hCG_1984214I3L0E3 225 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 PIK3CDO00329 1044 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 CABYRO75952 493 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 GH1P01241 217 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 TLE2Q04725 743 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 STK3Q13188 491 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 VSIG10LQ86VR7 867 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 ZNF713Q8N859 430 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-218ENST00000498136 NCOA5Q9HCD5 579 aaKnown RBP19.2■□□□□ 0.66
ABCF3-218ENST00000498136 POLR3EQ9NVU0 708 aa19.2■□□□□ 0.66
ABCF3-218ENST00000498136 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 DCDC2CA8MYV0 355 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 PPFIA3O75145 1194 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 SEC24BO95487 1268 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 CCDC62Q6P9F0 684 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 PHKBQ93100 1093 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 MROH7Q68CQ1 1323 aa19.19■□□□□ 0.66
ABCF3-218ENST00000498136 STXBP3O00186 592 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 ARVCFO00192 962 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 CLTBP09497 229 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 SCG2P13521 617 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 MAGEA10P43363 369 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 ADCY7P51828 1080 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 EVCP57679 992 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 MDM2Q00987 491 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 KCNV1Q6PIU1 500 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 DHX37Q8IY37 1157 aaKnown RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 ZNF274Q96GC6 653 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 LBHD1Q9BQE6 289 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 SLC26A6Q9BXS9 759 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 EHMT1Q9H9B1 1298 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 RTEL1Q9NZ71 1219 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 RBM27Q9P2N5 1060 aaKnown RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 DDX41Q9UJV9 622 aaKnown RBP19.18■□□□□ 0.66
ABCF3-218ENST00000498136 FRMPD4Q14CM0 1322 aa19.18■□□□□ 0.66
ABCF3-218ENST00000498136 SMCO2A6NFE2 343 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 CPLX1O14810 134 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 PRPF3O43395 683 aaKnown RBP19.17■□□□□ 0.66
ABCF3-218ENST00000498136 SORBS3O60504 671 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 STAM2O75886 525 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 RGS20O76081 388 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 PSMC6P62333 389 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 PURAQ00577 322 aaKnown RBP19.17■□□□□ 0.66
ABCF3-218ENST00000498136 ITGA7Q13683 1181 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 PFKFB3Q16875 520 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-218ENST00000498136 TYW1BQ6NUM6 668 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 AFG1LQ8WV93 481 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 RIC8AQ9NPQ8 531 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
ABCF3-218ENST00000498136 A6NJR5 290 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 TLR3O15455 904 aaKnown RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 IFNAR1P17181 557 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 CHMP4BP1P59074 171 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 MRPS9P82933 396 aaKnown RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 ARHGAP1Q07960 439 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 HABP4Q5JVS0 413 aaKnown RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 PCNX4Q63HM2 1172 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 CPLX2Q6PUV4 134 aaKnown RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 ANKRD33Q7Z3H0 272 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 SH3RF1Q7Z6J0 888 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 CCDC12Q8WUD4 166 aaPredicted RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 MTG1Q9BT17 334 aaPredicted RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
ABCF3-218ENST00000498136 TMEM39AQ9NV64 488 aa19.16■□□□□ 0.66
ABCF3-218ENST00000498136 KPNA6O60684 536 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 GGPS1O95749 300 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 MMP3P08254 477 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 TGFB3P10600 412 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 CDK7P50613 346 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 SSRP1Q08945 709 aaKnown RBP19.15■□□□□ 0.66
ABCF3-218ENST00000498136 LAMC2Q13753 1193 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 ANKRD1Q15327 319 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 NTRK3Q16288 839 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 C8orf34Q49A92 452 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 XRRA1Q6P2D8 792 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 TRIM22Q8IYM9 498 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 TOX2Q96NM4 488 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 GDF15Q99988 308 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 GLT8D2Q9H1C3 349 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 LTBP2Q14767 1821 aa19.15■□□□□ 0.66
ABCF3-218ENST00000498136 DOCK5Q9H7D0 1870 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 TRIM43BA6NCK2 446 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 RAG1P15918 1043 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 FAAP100Q0VG06 881 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 PKN1Q16512 942 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 FAM47CQ5HY64 1035 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 NLRX1Q86UT6 975 aa19.14■□□□□ 0.65
ABCF3-218ENST00000498136 TRIM43Q96BQ3 446 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms