RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 GH1P01241 217 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 HSD17B4P51659 736 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 CHMP4BP1P59074 171 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 PTPN11Q06124 597 aaPredicted RBP21.6■■□□□ 1.05
PRKCB-209ENST00000498058 GPNMBQ14956 572 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 GDF6Q6KF10 455 aaPredicted RBP21.6■■□□□ 1.05
PRKCB-209ENST00000498058 MCF2L2Q86YR7 1114 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 IWS1Q96ST2 819 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 SLC28A3Q9HAS3 691 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 PXMP2Q9NR77 195 aa21.6■■□□□ 1.05
PRKCB-209ENST00000498058 DDX41Q9UJV9 622 aaKnown RBP21.6■■□□□ 1.05
PRKCB-209ENST00000498058 PALM3A6NDB9 673 aaPredicted RBP21.59■■□□□ 1.05
PRKCB-209ENST00000498058 RGS20O76081 388 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 ARHGEF15O94989 841 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 CFBP00751 764 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 NR3C2P08235 984 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 CYP21A2P08686 494 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 GHRHRQ02643 423 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 STXBP2Q15833 593 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 ARHGEF16Q5VV41 709 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 DHX38Q92620 1227 aaKnown RBP21.59■■□□□ 1.05
PRKCB-209ENST00000498058 TTC28Q96AY4 2481 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 PCDHA11Q9Y5I1 949 aa21.59■■□□□ 1.05
PRKCB-209ENST00000498058 PITPNM1O00562 1244 aa21.58■■□□□ 1.05
PRKCB-209ENST00000498058 PFKMP08237 780 aa21.58■■□□□ 1.05
PRKCB-209ENST00000498058 ATP2A2P16615 1042 aaKnown RBP21.58■■□□□ 1.05
PRKCB-209ENST00000498058 CCDC85BQ15834 202 aaPredicted RBP21.58■■□□□ 1.05
PRKCB-209ENST00000498058 IL31RAQ8NI17 732 aa21.58■■□□□ 1.05
PRKCB-209ENST00000498058 AMNQ9BXJ7 453 aa21.58■■□□□ 1.05
PRKCB-209ENST00000498058 IGFBP4P22692 258 aa21.57■■□□□ 1.04
PRKCB-209ENST00000498058 CHMLP26374 656 aa21.57■■□□□ 1.04
PRKCB-209ENST00000498058 HOXA13P31271 388 aaPredicted RBP21.57■■□□□ 1.04
PRKCB-209ENST00000498058 PTGISQ16647 500 aa21.57■■□□□ 1.04
PRKCB-209ENST00000498058 STOX1Q6ZVD7 989 aa21.57■■□□□ 1.04
PRKCB-209ENST00000498058 SESTD1Q86VW0 696 aa21.57■■□□□ 1.04
PRKCB-209ENST00000498058 ZFP91Q96JP5 570 aaPredicted RBP21.57■■□□□ 1.04
PRKCB-209ENST00000498058 PDCD2LQ9BRP1 358 aa21.57■■□□□ 1.04
PRKCB-209ENST00000498058 RFXAPO00287 272 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 ZBTB5O15062 677 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 CYTH3O43739 400 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 EIF3JO75822 258 aaKnown RBP21.56■■□□□ 1.04
PRKCB-209ENST00000498058 GRM4Q14833 912 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 TCTN1Q2MV58 587 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 PPP2R2DQ66LE6 453 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 RETREG2Q8NC44 543 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 PIGSQ96S52 555 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 GTF3C3Q9Y5Q9 886 aa21.56■■□□□ 1.04
PRKCB-209ENST00000498058 EPOPA6NHQ4 379 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 SORBS3O60504 671 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 CA3P07451 260 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 RFC2P35250 354 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 HIC1Q14526 733 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 TJAP1Q5JTD0 557 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 GPKOWQ92917 476 aaPredicted RBP eCLIP21.55■■□□□ 1.04
PRKCB-209ENST00000498058 EMID1Q96A84 441 aaPredicted RBP21.55■■□□□ 1.04
PRKCB-209ENST00000498058 RIOX1Q9H6W3 641 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 HDAC6Q9UBN7 1215 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 PCDHA1Q9Y5I3 950 aa21.55■■□□□ 1.04
PRKCB-209ENST00000498058 HAS3O00219 553 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 ZNF286BP0CG31 522 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
PRKCB-209ENST00000498058 CASTP20810 708 aaKnown RBP21.54■■□□□ 1.04
PRKCB-209ENST00000498058 PSEN2P49810 448 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 ANTXR2P58335 489 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 SP2Q02086 613 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 BFSP2Q13515 415 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 PGM5Q15124 567 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 SPRED2Q7Z698 418 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 HOMER1Q86YM7 354 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 WNT8BQ93098 351 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 ALG1Q9BT22 464 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 FTOQ9C0B1 505 aaKnown RBP eCLIP21.54■■□□□ 1.043e-7■■■□□ 18.9
PRKCB-209ENST00000498058 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 GTF2IRD1Q9UHL9 959 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 NOD1Q9Y239 953 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 MRVI1Q9Y6F6 885 aa21.54■■□□□ 1.04
PRKCB-209ENST00000498058 TRANK1O15050 2925 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 E7EWF7 191 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 IFIT3O14879 490 aaKnown RBP21.53■■□□□ 1.04
PRKCB-209ENST00000498058 ZNF200P98182 395 aaPredicted RBP21.53■■□□□ 1.04
PRKCB-209ENST00000498058 TROAPQ12815 778 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 DGKDQ16760 1214 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 TMEM67Q5HYA8 995 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 CENPQQ7L2Z9 268 aaPredicted RBP21.53■■□□□ 1.04
PRKCB-209ENST00000498058 VSIG10LQ86VR7 867 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 CERS4Q9HA82 394 aa21.53■■□□□ 1.04
PRKCB-209ENST00000498058 PRRC2BQ5JSZ5 2229 aaKnown RBP21.53■■□□□ 1.04
PRKCB-209ENST00000498058 NBNO60934 754 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 F2P00734 622 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 ACTN1P12814 892 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 HOXD8P13378 290 aaPredicted RBP21.52■■□□□ 1.04
PRKCB-209ENST00000498058 COL9A3Q14050 684 aaPredicted RBP21.52■■□□□ 1.04
PRKCB-209ENST00000498058 MFSD10Q14728 455 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 TRIM71Q2Q1W2 868 aaKnown RBP21.52■■□□□ 1.04
PRKCB-209ENST00000498058 HSDL1Q3SXM5 330 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 MYSM1Q5VVJ2 828 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 TRAF7Q6Q0C0 670 aa21.52■■□□□ 1.04
PRKCB-209ENST00000498058 TMCO2Q7Z6W1 182 aaPredicted RBP21.52■■□□□ 1.04
PRKCB-209ENST00000498058 DHX37Q8IY37 1157 aaKnown RBP21.52■■□□□ 1.04
PRKCB-209ENST00000498058 PPTC7Q8NI37 304 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms