RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 F5H6K3 240 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 NDUFB10O96000 172 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 RPN1P04843 607 aaKnown RBP12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 CD44P16070 742 aaKnown RBP12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 UBA7P41226 1012 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 KLRC3Q07444 240 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 JAKMIP3Q5VZ66 844 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 KCTD1Q719H9 257 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 IRX2Q9BZI1 471 aaPredicted RBP12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 INTS13Q9NVM9 706 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 NFE2L3Q9Y4A8 694 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 PHLPP2Q6ZVD8 1323 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 TBC1D8O95759 1140 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 RPS12P25398 132 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 USP11P51784 963 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 ZNF280AP59817 542 aaPredicted RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 JAG1P78504 1218 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 TRAF1Q13077 416 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 CDC37Q16543 378 aaPredicted RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 TOGARAM2Q6ZUX3 1019 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 CABP7Q86V35 215 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 C7orf25Q9BPX7 421 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 MMTAG2Q9BU76 263 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 A0A1B0GTH6 734 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 FAM196BA6NMK8 535 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 KLRC4O43908 158 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 RHOBTB3O94955 611 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 OAS2P29728 719 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
SNRNP200-208ENST00000497539 GH2P01242 217 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 SLURP2P0DP57 97 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 PPP1R2P41236 205 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 CALCRLQ16602 461 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 HYIQ5T013 277 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 C1QTNF12Q5T7M4 302 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 SYDE2Q5VT97 1194 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 EFCAB8A8MWE9 144 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 RAD17O75943 681 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 BMP3P12645 472 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 MAP9Q49MG5 647 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 TMEM119Q4V9L6 283 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 TMEM139Q8IV31 216 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 AMNQ9BXJ7 453 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 RAB34Q9BZG1 259 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
SNRNP200-208ENST00000497539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.347e-9■■■■■ 129
SNRNP200-208ENST00000497539 MYO1CO00159 1063 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 GDF11O95390 407 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 SLC16A2P36021 539 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 SMC1AQ14683 1233 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 MTF1Q14872 753 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 ZBTB21Q9ULJ3 1066 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 LRRC10BA6NIK2 292 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 PP2D1A8MPX8 630 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 SLC37A4O43826 429 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 PLCG1P19174 1290 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 POLD1P28340 1107 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 PPP2R3AQ06190 1150 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 CXCL9Q07325 125 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 NR1I3Q14994 352 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 SUGP1Q8IWZ8 645 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 ADSSL1Q8N142 457 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 GIMAP8Q8ND71 665 aaPredicted RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 ATRIPQ8WXE1 791 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 PARD6BQ9BYG5 372 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 TAOK3Q9H2K8 898 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 DEF6Q9H4E7 631 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 LIMA1Q9UHB6 759 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
SNRNP200-208ENST00000497539 PBX1P40424 430 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 INHBEP58166 350 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 SPAG1Q07617 926 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 TNIP1Q15025 636 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 CIAPIN1Q6FI81 312 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms