RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
HLA-B-254ENST00000497377 DIS3LQ8TF46 1054 aaKnown RBP13.2□□□□□ -0.3
HLA-B-254ENST00000497377 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
HLA-B-254ENST00000497377 Q9Y3F1 56 aa13.2□□□□□ -0.3
HLA-B-254ENST00000497377 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
HLA-B-254ENST00000497377 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 IFNAR1P17181 557 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 CST5P28325 142 aaPredicted RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 ADCYAP1R1P41586 468 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 GJA9P57773 515 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 GJC2Q5T442 439 aaPredicted RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 CPLX2Q6PUV4 134 aaKnown RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 RNF26Q9BY78 433 aaPredicted RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 UPF3AQ9H1J1 476 aaKnown RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
HLA-B-254ENST00000497377 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
HLA-B-254ENST00000497377 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 KIAA1217Q5T5P2 1943 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 hCG_1642624A0A1W2PR95 340 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 CPLX1O14810 134 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 ADAMTS4O75173 837 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 EIF3JO75822 258 aaKnown RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 PGK1P00558 417 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 NR3C2P08235 984 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 EIF2AK2P19525 551 aaKnown RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 NAPAP54920 295 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 PFKFB3Q16875 520 aaPredicted RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 PCSK9Q8NBP7 692 aaKnown RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 WDR11Q9BZH6 1224 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 AP5M1Q9H0R1 490 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
HLA-B-254ENST00000497377 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
HLA-B-254ENST00000497377 MOXD2PA6NHM9 499 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 MEIS2O14770 477 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 ADCY6O43306 1168 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 STAM2O75886 525 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 C6orf222P0C671 652 aaPredicted RBP13.17□□□□□ -0.3
HLA-B-254ENST00000497377 SCG2P13521 617 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 SMPD1P17405 629 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 CCND2P30279 289 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 NEK4P51957 841 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 CCT2P78371 535 aaKnown RBP13.17□□□□□ -0.3
HLA-B-254ENST00000497377 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 PGM5Q15124 567 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 NTRK3Q16288 839 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 KCNV1Q6PIU1 500 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 DPF3Q92784 378 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
HLA-B-254ENST00000497377 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
HLA-B-254ENST00000497377 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
HLA-B-254ENST00000497377 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 NR2E3Q9Y5X4 410 aa13.17□□□□□ -0.3
HLA-B-254ENST00000497377 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
HLA-B-254ENST00000497377 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.16□□□□□ -0.3
HLA-B-254ENST00000497377 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 STXBP3O00186 592 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 ZEB2O60315 1214 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 EVI5O60447 810 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 CDKL5O76039 1030 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
HLA-B-254ENST00000497377 ADCY7P51828 1080 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 AK2P54819 239 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 GNASQ5JWF2 1037 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 MCTP2Q6DN12 878 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
HLA-B-254ENST00000497377 C22orf23Q9BZE7 217 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
HLA-B-254ENST00000497377 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
HLA-B-254ENST00000497377 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
HLA-B-254ENST00000497377 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
HLA-B-254ENST00000497377 DYNC1LI2O43237 492 aaPredicted RBP13.15□□□□□ -0.3
HLA-B-254ENST00000497377 PFKFB2O60825 505 aa13.15□□□□□ -0.3
HLA-B-254ENST00000497377 FOSP01100 380 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms