RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 IFNL3Q8IZI9 196 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CRACR2BQ8N4Y2 399 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 DEFB123Q8N688 67 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CCDC155Q8N6L0 562 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 KLHL23Q8NBE8 558 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 KCT2Q8NC54 265 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 BVESQ8NE79 360 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 PPP1R13LQ8WUF5 828 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 HOOK2Q96ED9 719 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF512BQ96KM6 892 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CCDC74BQ96LY2 380 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC6A18Q96N87 628 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 AIFM3Q96NN9 605 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 TTC1Q99614 292 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CDC6Q99741 560 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 SENP7Q9BQF6 1050 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 WDR18Q9BV38 432 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 SARGQ9BW04 601 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 SMG9Q9H0W8 520 aaKnown RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 MTMR10Q9NXD2 777 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 APEX2Q9UBZ4 518 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 PGAP2Q9UHJ9 254 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 ABT1Q9ULW3 272 aaKnown RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 PCDHB10Q9UN67 800 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 HTTP42858 3142 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF318Q5VUA4 2279 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ELOA3CA0A087WX78 387 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 A0A0G2JLW4 131 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 LOC100289279A0A1B0GTE1 492 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 TRIM75PA6NK02 468 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ELOA3DA6NLF2 546 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 HMGB1P1B2RPK0 211 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 C9IYK1 514 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ARVCFO00192 962 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CBX4O00257 560 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 NEMP1O14524 444 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ERC2O15083 957 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 F2P00734 622 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CST3P01034 146 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 PGRP06401 933 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 RAG1P15918 1043 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CD247P20963 164 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ADH6P28332 368 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 HOXC12P31275 282 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 FLT3P36888 993 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 GRIA2P42262 883 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 MRE11P49959 708 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 MECP2P51608 486 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 TGFB2P61812 414 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 POU5F1BQ06416 359 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ITKQ08881 620 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 MLC1Q15049 377 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 PKN2Q16513 984 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 RGL3Q3MIN7 710 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ELOA3BQ3SY89 546 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ACBD5Q5T8D3 534 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 NBPF12Q5TAG4 269 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZCCHC8Q6NZY4 707 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ELMSAN1Q6PJG2 1045 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CLEC4GQ6UXB4 293 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 FGD2Q7Z6J4 655 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 RAB44Q7Z6P3 723 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 C14orf80Q86SX3 495 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 LDHDQ86WU2 507 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 HID1Q8IV36 788 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 UBR7Q8N806 425 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CNTD1Q8N815 330 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 RNF214Q8ND24 703 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ELOA3Q8NG57 546 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 SYTL5Q8TDW5 730 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 WDR89Q96FK6 387 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 FBXL18Q96ME1 805 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 IPO9Q96P70 1041 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CORO1BQ9BR76 489 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 UBE2OQ9C0C9 1292 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 NKX2-4Q9H2Z4 354 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 SUGCTQ9HAC7 445 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CASS4Q9NQ75 786 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 SH2B1Q9NRF2 756 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 GNL3LQ9NVN8 582 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 OBP2AQ9NY56 170 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CRIM1Q9NZV1 1036 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 TRHDEQ9UKU6 1024 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 HIF3AQ9Y2N7 669 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 PTPN22Q9Y2R2 807 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 TNPO3Q9Y5L0 923 aaKnown RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 FHOD1Q9Y613 1164 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 KDM6AO15550 1401 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 USP6P35125 1406 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 EEA1Q15075 1411 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 ERBINQ96RT1 1412 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 TUBGCP6Q96RT7 1819 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 MYO5BQ9ULV0 1848 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 CDC42BPGQ6DT37 1551 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 SBF1O95248 1867 aa3.16□□□□□ -1.9
CKS1BP2-201ENST00000497342 EIF2AK4Q9P2K8 1649 aaKnown RBP3.15□□□□□ -1.9
CKS1BP2-201ENST00000497342 ACACBO00763 2458 aa3.15□□□□□ -1.9
CKS1BP2-201ENST00000497342 A0A1W2PPC1 479 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 FSCN2O14926 492 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms